Endosymbiont of Acanthamoeba sp. UWC8: I862_03965 Help Entry I862_03965        CDS       T03255                                  Name (GenBank) NAD-dependent DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism eaa  Endosymbiont of Acanthamoeba sp. UWC8 Pathway eaa03030   DNA replication eaa03410   Base excision repair eaa03420   Nucleotide excision repair eaa03430   Mismatch repair Brite KEGG Orthology (KO) [BR:eaa00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     I862_03965    03410 Base excision repair     I862_03965    03420 Nucleotide excision repair     I862_03965    03430 Mismatch repair     I862_03965  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:eaa03032]     I862_03965    03400 DNA repair and recombination proteins [BR:eaa03400]     I862_03965 Enzymes [BR:eaa01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      I862_03965 DNA replication proteins [BR:eaa03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      I862_03965 DNA repair and recombination proteins [BR:eaa03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      I862_03965    NER (nucleotide excision repair)     GGR (global genome repair) factors      I862_03965    MMR (mismatch excision repair)     DNA ligase      I862_03965   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       I862_03965 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT Nlig-Ia DNA_ligase_ZBD PTCB-BRCT HHH_5 HHH Zn_ribbon_NUD BRCT_2 Motif Other DBs NCBI-ProteinID:  AIF81353 UniProt:  A0A075MJI3 LinkDB All DBs Position complement(815382..817412) Genome browser AA seq 676 aa AA seqDB search MKRSLSEEIANLQKEIRHHDYLYYNLNSPEISDAKYDELRKRLEALEKELKRQGGQSTLD LVGFEPDRRFKKVKHTYPMLSLANAFEMTDIEEFITKVNRFLGLPEDNSLDLCCEPKIDG LSFAAVFEKGKLVRGATRGDGEFGEDITQNLKQVISFPEQVELKEDFEVRGEVYMLKSDF LKLNETQEKANKQIFANPRNAAAGSLRQLDSSITKSRNLRYFIWSGDIGGVSTQHQLLSK LKDLGFCTNIHIKVAGSVEEIEEYYKDMQFKRSSLDYDIDGVVYKVNDFVLQNRLGIVSR APRWAIAHKFSAEKAITKIKNIIIQVGRMGTLTPVAELEPVNVGGVLVSRATLHNEEEII RKDFRIGDTVVVQRAGDVIPQVIEVILDHRPSDTKAFRLPGYCPICGSEAVKNPDEVAKR CSGGLKCKAQVIEKLKHFVSRNAFNIEGLGEKQIEEFYHDSLVTTPVDLFTLEERDIKAD HKIMRREGWGKKSSENLFNAINKSRAITLDKFIYALGIRHVGEVTAKLLAVHFSNIEFLL NAFNVENIEDELINIEGIGEVMANEIIHFFKDNFNSNLIARLLEYITVLDYSSPKTGENE YSGKTFVFTGSLKNMTRSEAKAIAERMGAKVASAVSKSTNFVVAGEDAGSKLENAKKLGV NILSEEEWINIAKQIG NT seq 2031 nt NT seq  +upstreamnt  +downstreamnt atgaaaagaagtttgtcggaagaaatagctaatttacaaaaagaaatcaggcatcacgac tacctatattataacctgaatagtcctgaaatttccgatgctaaatatgatgaattaaga aaaaggctggaagctttagaaaaagagctgaagcggcaaggggggcaaagcacgcttgat ctggtcggctttgagccggataggagatttaaaaaagttaagcatacctatcctatgctc tcacttgctaatgctttcgagatgacggatatagaggaatttattacaaaagttaatcgg tttttaggactacccgaagataattcgcttgatttatgctgtgagcccaaaattgacggc ttatctttcgccgcagtatttgaaaaaggaaagttagtgaggggtgcaaccaggggagac ggagaattcggtgaggacattacccaaaacttaaagcaggtgataagctttcctgagcag gtggaattaaaggaggattttgaagttagaggtgaggtatatatgcttaagagtgatttt cttaagcttaacgagactcaggaaaaagcgaataaacaaatatttgcaaatcctcgtaat gccgccgcaggttcattaaggcagctcgatagcagcattactaaatcaaggaatttacga tattttatttggagcggagatatagggggcgtaagtactcaacatcagttgctaagcaaa cttaaggatttagggttttgtactaatatccatattaaagtagccgggtcagtagaggag attgaagaatactataaagatatgcaatttaagcgcagttcacttgattatgatatagat ggggtggtttataaggttaatgattttgttttgcagaataggctaggaatagtaagtagg gcgccaaggtgggcgatagctcataaattttcagctgaaaaagcgataacaaaaataaaa aatataattatacaagtcggcagaatgggaacactcactccggttgccgagctggaaccg gtgaatgtaggcggggttttggtatccagagctacgctccataatgaagaagagattatt cgtaaggattttaggatcggtgatactgtagtagtgcagagagccggggatgttatacct caagtaattgaagtaattttagatcatagaccttctgatactaaggcattcaggttacct ggttactgtccgatatgtggaagtgaagctgtaaaaaatccggatgaagttgctaaaagg tgctcaggcgggctaaaatgtaaagcacaagtgatcgagaaattaaagcattttgtctct cgtaatgcttttaatatcgagggcttaggagaaaagcaaatagaagagttctatcatgat agcttagttactactccggttgatttatttactcttgaagaacgagatattaaagctgat cataaaataatgcgaagagaagggtgggggaaaaaatcttccgaaaacttattcaatgct ataaacaagtcacgtgccattacgttagataaatttatttatgcgctagggattaggcat gtgggggaagttaccgctaagcttctggctgtacatttcagtaatatagaatttttatta aatgcttttaatgtagaaaatattgaagatgaacttatcaatattgaaggtattggtgag gtgatggcaaatgaaatcattcatttctttaaagataattttaatagtaatttgattgct aggcttttggaatatattactgttttggattacagttctcccaaaacaggtgagaatgaa tacagcggtaaaacattcgtatttaccggcagtcttaaaaatatgacacgcagtgaagca aaagcaattgccgaaagaatgggggctaaggttgcttcagcagtctcaaagagcacaaac ttcgtggttgcaggagaagatgcgggatctaagcttgaaaatgctaaaaagctcggggtg aacattttatccgaagaggaatggataaatatagctaagcaaataggctaa

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