Exiguobacterium acetylicum: KKI46_02655
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Entry
KKI46_02655 CDS
T07509
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eace
Exiguobacterium acetylicum
Pathway
eace03030
DNA replication
eace03410
Base excision repair
eace03420
Nucleotide excision repair
eace03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eace00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KKI46_02655 (ligA)
03410 Base excision repair
KKI46_02655 (ligA)
03420 Nucleotide excision repair
KKI46_02655 (ligA)
03430 Mismatch repair
KKI46_02655 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eace03032
]
KKI46_02655 (ligA)
03400 DNA repair and recombination proteins [BR:
eace03400
]
KKI46_02655 (ligA)
Enzymes [BR:
eace01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
KKI46_02655 (ligA)
DNA replication proteins [BR:
eace03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KKI46_02655 (ligA)
DNA repair and recombination proteins [BR:
eace03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
KKI46_02655 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KKI46_02655 (ligA)
MMR (mismatch excision repair)
DNA ligase
KKI46_02655 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KKI46_02655 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
HHH
Nlig-Ia
PTCB-BRCT
RNA_pol_A_CTD
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QWB30593
UniProt:
A0ABX8GAG0
LinkDB
All DBs
Position
499718..501712
Genome browser
AA seq
664 aa
AA seq
DB search
MDASQRIDEIRQTLNRYSYEYYVLDQPTVPDATYDQLLRELTELETEHPELITPDSPTQR
VGAAPLEAFEKVTHDLPMLSLGNVFDETEIREWVARIERSLGRSTTYVAELKFDGLAISL
KYEDGRFVRGATRGDGTVGENITQNLRTIKALPLRLQAEETVEVRGEAYMPKQSFERLNE
DRASREETLFANPRNAAAGSLRQLDSSITASRNLSLFVYGVGVNTLTARSHSEAMAQLAS
LGLPTNQHMQTCETVEEILAYIAHWTEARASLPYEIDGIVLKVDRYDDQEELGFTAKSPR
FATAYKFAAEEVMTTVEDVDFSVGRTGKVTPRARFAPVVVAGSTVTYATLHNADFIAEKD
IRLQDSVIIKKAGDVIPAVVQVVTAERTGEETPIVFPTHCPACQSELVRLEGEVDIRCVS
PECPAQLMEGIIHFVSRQAMNIDGLGEKVVRQLYDHEAIRTIADLYRLDREELLTFDRMG
ETSVDKLLAAIEASKQNSVERLLFGLGIRLVGQKAAYLLAERFDSLAGIAAASYDEIVAI
DGIGGKIADSIVKYFEHPEAQALIRDLEQLGVNQRFLGERVDQTNAPLGGKTIVLTGTLE
SLKRSEAGKRLEALGADVTGSVSKKTDVLVAGEKAGSKLTKAESLGIEIWDEARLLEELA
KHEA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaagccagcgtatagatgagattcgtcaaacattgaaccgatacagctacgaa
tactacgtactggatcaaccaacggtaccggatgcgacgtacgatcaattgcttcgtgaa
ctgacggagttagaaacagagcatccagaactgatcacaccggattcgccgacgcaacgg
gtcggcgcagcaccgctcgaagcgttcgagaaggtgacgcatgatctaccgatgctgtcg
ctcggaaacgtctttgatgagacagaaattcgcgaatgggttgctcggattgagcggtcg
ctcggacgttcgacgacgtatgtcgccgaactgaaattcgatggacttgccatctcgctg
aaatacgaagacggtcgattcgttcgtggggcaacgcgtggcgatggaacagtcggtgag
aacatcacgcagaacctacggacgatcaaagcgttaccgctgcgtttgcaggcagaagag
acggtcgaggtccgcggtgaggcttacatgccgaagcaatcgttcgaacgcttgaatgaa
gatcgggcaagccgggaagagacattgttcgcgaatccgcgtaacgctgcagcaggtagt
ctgcgccagctcgattcctcgatcacagcgtcgcgcaatctgtcgttgttcgtgtatggc
gtcggtgtcaatacgttgacggcccgttcacatagcgaagcgatggcacaactggcttca
ctcgggttaccgaccaatcaacatatgcagacgtgtgagacggtggaagagattcttgcc
tacatcgcgcactggacagaagcacgcgcgagcctgccatatgagattgacggaatcgtc
ttgaaagtcgatcggtacgatgatcaggaagagctcggcttcacagcaaaaagtccccgc
ttcgcgacagcctataagtttgcggcggaagaagtcatgacaacggttgaagacgttgat
ttcagtgtcggtcggaccgggaaagtcacacctcgcgcccgttttgcaccggttgtcgtt
gcaggatcgacagtgacgtatgcgacactgcacaacgccgacttcatcgctgaaaaagat
attcgccttcaggactcggtcatcattaaaaaagcgggcgatgtcatcccggcagtcgta
caagttgtcacggcagaacggacaggggaagagacaccaatcgtcttcccaacgcattgt
ccggcttgtcagtcggaacttgtccgtctcgaaggtgaagtcgacatccgctgtgtcagt
ccggaatgcccagcgcaattgatggaaggcatcattcacttcgtttcacgtcaggcgatg
aacatcgatggtctcggtgaaaaagtcgtccgtcaattgtatgaccatgaagcgatccgg
acgattgccgatttatatcgactcgatcgtgaggagttgttgacgttcgaccggatgggt
gagacgtccgttgataaattgcttgcggcgatcgaagcctcgaaacagaactcggtcgag
cgtctgttgtttggtctcggaatccgactcgttggtcaaaaagcggcatatctcttagcg
gaacgttttgattcgttagcggggattgcagcagcgagctacgacgaaatcgtcgcgatt
gacggcatcggtgggaaaatcgcagattcaatcgtgaagtacttcgaacatccggaagca
caggcattgattcgtgatttggaacaacttggcgtcaatcaacgtttccttggtgaacgg
gttgatcagacgaatgcaccactcgggggcaaaacgattgtcttgacgggaacgctcgag
agtttaaaacggtcagaggccggtaaacgactcgaagcacttggtgccgatgtgacagga
agcgtcagtaaaaagacggacgtacttgtcgcaggggaaaaggcgggctctaaactgacg
aaagcggaatcgcttggtatcgaaatttgggatgaagcgcgtctgttagaagaactagct
aaacacgaagcgtga
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integrated database retrieval system
