Ensifer adhaerens OV14: OV14_3569
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Entry
OV14_3569 CDS
T03054
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ead
Ensifer adhaerens OV14
Pathway
ead03030
DNA replication
ead03410
Base excision repair
ead03420
Nucleotide excision repair
ead03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ead00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OV14_3569 (ligA)
03410 Base excision repair
OV14_3569 (ligA)
03420 Nucleotide excision repair
OV14_3569 (ligA)
03430 Mismatch repair
OV14_3569 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ead03032
]
OV14_3569 (ligA)
03400 DNA repair and recombination proteins [BR:
ead03400
]
OV14_3569 (ligA)
Enzymes [BR:
ead01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
OV14_3569 (ligA)
DNA replication proteins [BR:
ead03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OV14_3569 (ligA)
DNA repair and recombination proteins [BR:
ead03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
OV14_3569 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OV14_3569 (ligA)
MMR (mismatch excision repair)
DNA ligase
OV14_3569 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OV14_3569 (ligA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
Nlig-Ia
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
HHH
FdhE_central
DUF4796_N
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
AHK44859
LinkDB
All DBs
Position
1:complement(3409243..3411396)
Genome browser
AA seq
717 aa
AA seq
DB search
MSSELKPVEKLNETEAAEELAFLASELARHDALYHGNDAPEITDADYDALKRRNDAIEAQ
FPALAREDSPSKKVGAAPSVTFQPVVHARPMLSLDNTFSDEDARDFVASVYRFLGQLPDN
SIAFTAEPKIDGLSMSLRYENRRLVTAATRGDGTTGENVTANIRTIGMIPQTLPAGAPEI
VEVRGEIYMAKSDFAALNAEMAALGKPLYVNPRNTASGSLRQLDAKVTASRKLRFFAYAW
GEMSEMPADTQFGMVEAFKAWGFPVNPLMQRISSADELLTHYHHIERERPDLDYDIDGVV
YKVDRLDLQARLGFRSRSPRWATAHKFPAEQAFTRLTAIDIQVGRTGALTPVARLEPITV
GGVVVTNATLHNEDYIKGLGNSGEPIREGRDIRIGDMVIVQRAGDVIPQIVDVVMDERKE
GSEPYRFPTTCPVCGSHAVRDINEKSGKVDAVRRCTGGFVCRAQAVEHLKHFVSRNAYDI
EGLGSKQIEFFFESEDPTLSIRTAADIFTLEKRQETSLTKLENIDGFGRVSVRKLYDAIN
TRRSIALHRFIYALGIRHVGETTAKLLARSYGTYEAFGAAMSEAGTFTGDAWNELNSIDG
IGEVVARAIVEFYKEPRNLEVVTRLLAEVTPEGAEIPVASDSPVAGKTVVFTGSLEKMTR
DEAKAKAESLGAKVAGSVSKKTDIVVAGPGAGSKLDKARELGVQTMDEDEWLALIGG
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgaactgaaacccgtcgagaagctgaacgaaacggaagccgccgaggagctg
gcctttctcgcctccgagcttgcccggcacgacgcgctctatcatggcaacgacgcgccg
gagatcacggatgcggactatgacgcgctgaagcggcgcaacgatgcgatcgaggcgcag
tttccggcgcttgcgcgcgaggacagcccatcgaagaaggtgggggcagcgccatccgtt
accttccagccggtcgttcatgcccggccgatgctgtcgctcgacaacacgttttccgac
gaggacgcccgcgatttcgtcgcctcggtctaccgcttcctcgggcagctgccggataat
tcgatcgcctttaccgccgagccgaagatcgacggcctctcgatgtcgctgcgctacgag
aaccggcggctggtgacggcggcgacccgtggcgacggcacaacaggtgaaaacgtcacc
gccaatatccgcaccatcggcatgatcccgcagacgctgccggccggcgctcctgagatc
gtcgaggtgcgcggcgaaatctacatggcgaagtccgactttgccgcactcaacgccgag
atggcagcgctcggcaagccgctctacgtcaacccgcgcaacaccgcttccgggtcgctc
cgccagctcgacgccaaggtgactgccagccgcaagctgcgcttctttgcctatgcctgg
ggcgaaatgtcggaaatgcctgccgatacccaattcggcatggtcgaggcattcaaggcc
tggggtttcccggtcaatccactgatgcagcggatttcgtcggccgacgagctgctgacg
cattaccaccatatcgagcgcgaacggcctgatctcgactatgatatcgacggcgtcgtc
tacaaggtcgaccggctcgacctgcaggcgcggctcggtttccgctcgcgctcgccccgc
tgggcgacggcgcacaagttcccggccgagcaggcatttacgcggctgacggccatagac
atccaggtggggcgcaccggcgcgctgacgccggtggcacggctggagccgatcaccgtc
ggcggcgtcgtcgtgaccaatgcgacgctgcacaacgaggattacatcaaggggctcggc
aacagcggcgaaccgatccgcgagggtcgcgacatccgtatcggcgacatggtgatcgtc
cagcgggcgggcgacgtcatcccgcagatcgtcgacgtggtgatggacgagcgcaaggag
gggagcgagccctatcgttttccgacgacatgcccggtctgcggcagccatgcggtgcgc
gacatcaacgagaagtccggcaaggtggatgcagtgcgccgctgcaccggcggcttcgtc
tgccgggcgcaggcggtcgagcatctcaagcatttcgtctcgcgcaatgcctatgacatc
gaaggcctcggctccaagcagatcgagttcttcttcgagagcgaggatccgacgctgtcg
atccgcacggcggccgacatcttcacgctggaaaagcgccaggagacgtcgctgacaaag
ctcgaaaacatcgacggcttcggccgcgtcagcgtgcgcaagctctatgacgcgatcaac
acccgccgctcgatcgcgctgcatcgcttcatctacgcgcttggcatccgccatgtcggg
gagaccacggccaagctgctcgcgcgctcctacggcacctacgaggccttcggcgcagcc
atgagcgaagccggcacctttacgggtgatgcctggaacgaactcaacagtatcgacggc
atcggcgaagtcgtcgcccgcgccatcgtcgagttctacaaggagccgaggaaccttgaa
gtggtgacgcgactgcttgccgaagtgacgcccgaaggggcggagataccggttgcgagc
gacagcccggtcgccggcaagaccgtggtcttcaccggttcgctcgaaaagatgacgcgc
gatgaggccaaggccaaggcggaaagcctcggcgccaaggtggcaggttccgtgtcgaag
aagaccgatatcgtcgtcgccggcccgggagcgggctccaagctcgacaaggcgcgcgaa
ctcggcgtgcagacgatggacgaggacgagtggctggcgctgatcgggggctga
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