Klebsiella aerogenes KCTC 2190: EAE_00345
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Entry
EAE_00345 CDS
T01529
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eae
Klebsiella aerogenes KCTC 2190
Pathway
eae03030
DNA replication
eae03410
Base excision repair
eae03420
Nucleotide excision repair
eae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAE_00345 (ligA)
03410 Base excision repair
EAE_00345 (ligA)
03420 Nucleotide excision repair
EAE_00345 (ligA)
03430 Mismatch repair
EAE_00345 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eae03032
]
EAE_00345 (ligA)
03400 DNA repair and recombination proteins [BR:
eae03400
]
EAE_00345 (ligA)
Enzymes [BR:
eae01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EAE_00345 (ligA)
DNA replication proteins [BR:
eae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EAE_00345 (ligA)
DNA repair and recombination proteins [BR:
eae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EAE_00345 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAE_00345 (ligA)
MMR (mismatch excision repair)
DNA ligase
EAE_00345 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EAE_00345 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
RNA_ligase
DUF2229
Prok-E2_C
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AEG95007
UniProt:
A0A0H3FQ42
LinkDB
All DBs
Position
complement(67208..69223)
Genome browser
AA seq
671 aa
AA seq
DB search
MEPIEQKLTELRTTLRHHEYLYHVMDTPEIPDAEYDRLMRELRELEAQHPELITPDSPTQ
RVGAAPLASFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRLSDTADLTWCCELKLDGLA
VSILYENGVLMQAATRGDGTTGEDITSNVRTIRAIPLKLRGDNIPARLEVRGEVFLPQAG
FEKINEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPASHS
ARLQQFKQWGLPVSDRVKLCHSPEEVLTYYRQVEEDRPKLGFDIDGVVIKVDSLALQEQL
GFVARAPRWAVAFKFPAQEQMTFVNDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN
ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEHTREIIFPTHCPVCHSDVERVEG
EAVARCTGGLICGAQRKEALKHFVSRRALDVDGMGDKIIDQLVEKEYVHTPADLFRLSAG
KLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAHFGTIEALEQ
ASIEELQKVPDVGIVVATHTFNFFAEESNREVIAQLRAEGVRWPAPVVVKAEEIDSPFAG
KTVVLTGSLSQLSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI
DEAEMMRLLGE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaatcgaacaaaaactgactgaactgcgaaccacccttcgccatcatgaatat
ctgtatcatgttatggacaccccggagattcccgatgcggaatatgaccggctgatgcgc
gaactgcgcgaactcgaagcgcaacatcctgagctgattacccctgactcgccgacccaa
cgcgttggcgcggcgccgttggcctctttcagccagattcgccatgaagtgcccatgctg
tcgctggataacgtctttgatgaagagagtttcctcgcctttaacaaacgcgtgcaggac
cgtttaagcgatacggcggatctgacctggtgctgcgagctcaagctcgatggcctggcg
gtcagtatcctctatgaaaacggcgtgctgatgcaggcggcgacccgtggcgatggcacc
accggcgaggatattacctccaacgtgcgaaccattcgcgctattccgctgaagctacgc
ggcgacaatatcccggcgcggctggaagtgcgcggagaagtgttcctgccgcaggccgga
tttgaaaaaatcaatgaagaagcgcgccgcaccggcggcaaagtatttgctaacccgcgc
aatgccgccgcgggttcgttgcgccagttggatccgcgtattaccgcgaagcgaccgctt
actttcttctgctacggtgttggcgtgctggaaggcggtgaactaccggccagccactcc
gcgcgtttgcagcagtttaagcagtggggattgccggtgagcgaccgcgtgaagctgtgt
cattctccagaggaagtgcttacttactatcgccaggttgaagaagaccgtccgaaactt
ggttttgatattgacggcgtggtgattaaagtcgattcgctggcgctgcaggagcagctt
ggtttcgtcgcccgcgctccgcgctgggcggtggcctttaaattcccggcccaggagcag
atgacttttgtcaacgatgtggaattccaggttggccgtaccggagcgattacgccggta
gcgcgccttgaaccggtgcacgtggccggggtactggtcagtaacgccaccctgcataac
gccgacgaaatcgaacgtttaggtctgcgtattggcgacaaagtggtgattcgccgcgcg
ggggacgtgatcccgcaggtcgtcaacgtggtgctttctgaacgcccggaacatacgcgt
gaaatcatcttccccacacattgtccggtatgtcattccgatgttgaacgggtggaaggg
gaagcggtggcgcgctgtaccggcgggcttatctgcggcgcacagcgtaaagaagcgctg
aagcactttgtctcccgacgggcgctggatgtcgacggtatgggcgataaaatcatcgat
cagctggttgagaaagagtacgtccatacgccagccgatctgttccggctcagcgccggt
aagcttaccgggctggatcgcatgggaccgaaatcggcgcaaaatgtggtcaacgcgctg
gagaaagcgaaagagacgaccttcgcccgcttcctgtatgcgttaggtattcgcgaagtc
ggtgaggcgacagcagcgggactggcagcgcattttggcactattgaagcgctggaacag
gcttcgattgaggagctgcagaaggtgcctgacgtcgggattgtcgtcgccacacatact
tttaacttcttcgccgaagagagcaaccgcgaggtcatcgcgcaactgcgcgctgaaggc
gttcgctggccggcgccggtggtggtgaaggcggaagaaattgacagtccgtttgctggt
aaaaccgtggtattaaccggtagcctgagccagctgtcgcgcgatgatgccaaagcgcgg
ctggtcgcgctgggggcgaaagtcgccggcagcgtgtcgaagaaaaccgatctggtgatt
gccggcgaagcggcgggctctaagcttgcgaaggcgcaggagttaggcattgaggttatc
gacgaagccgaaatgatgcgcctgctgggagaataa
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integrated database retrieval system
