Eurytemora affinis: 111709746
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Entry
111709746 CDS
T07296
Name
(RefSeq) telomerase-binding protein EST1A-like
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
eaf
Eurytemora affinis
Pathway
eaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111709746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eaf03019
]
111709746
03032 DNA replication proteins [BR:
eaf03032
]
111709746
Messenger RNA biogenesis [BR:
eaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
111709746
mRNA cycle factors
Common to processing body (P body) and stress granule
111709746
DNA replication proteins [BR:
eaf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
111709746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
111709746
NCBI-ProteinID:
XP_023339411
LinkDB
All DBs
Position
Unknown
AA seq
1580 aa
AA seq
DB search
MASNPSIANEAEEMRREEERRKRPDVQRYKPGAFNRKPEPLFPEGSFKPEIRTVGIVSER
NKENRRGGQGVTEQTGNKDKGRKPEKEHFVSKKVQEKVVHESKDGVKSGSRVEENSIIQD
TGGGTNTRKRKNKKNKSKDKDKTIITVAASEENVVTKPTPLLNGDDHKPAQVKKPEKSQH
DDIPTRSHYSGAAQRNNGRKDRDKITPKPDNQDGKDRVKQNPKSDNHDMKDRDKKNPKPD
KQDGKNQEKQNPKSENQDGKDHVFRVPDPVSRNYQEKRSDRRGHVSDRRDYKPSRDDRGL
DLYDQRQGKREMNPELGERLESWGRGGGRNENGFQRSDRGGDYCSHRGFSGSERRSDRDL
RGSGHGMRGADRNRFNRDVPQGRSQGMDYNLRGDSEPKENGRTSWKQDQFSRGGRRGGSR
GSSPQRGGRGRWSRGSSPSRSSRGNSPIRANSRPDSRRTSPSFQHSRTNSPVRHTRVFRK
NNSPPSQRSTVSRTPSPRSRRNQDTRDLDGYTRDQRRRDEGLWDPQGKPPSGRVKSAPVK
TSLPPRFQKTKERKISRRLETETCHMSDWSVEMEEEDERKSQLGLSPPSGPGIIRISEPQ
TGSALELRAQPIRPGTYSAPFHPSWNQTLPANMSAEKEKFLFDPSNPMKPIRMQDMSARD
RLDNSYPDFSCPTNPNMRFPMGVSRFNPPPQMYPPNMIPMHPGPGAGYQPPFPQPIMPTS
GVAFHPAFHGPDWFNVFDSNIYGSGKIDINIIVRIVSADKKLRHLVQGGPAVICNRWDQE
VREIRHEIMKAARLLLQTDLYFVCEKEVDAYIWKSVYYQVIEMLKFSFFDTENTTPETKQ
VLKSQLLIILEEGVDYFTQLLKDIGDQYHVDLDRFYDVLEPRDLDKTGRLALIICQKLLL
YLGDLARYKEQVNSTSNYGRARQYYQKANHLDMRNGRPFNMLAILAKLSNRKFEAVYYNI
RCLMSRNPFTPSSKEGLSVIFDEMKRRWELGEKQKLDKKVEESDKTNGSLLIKGSRVRRE
IWIRGEAGRRLHRTTSATATSESLSCDLENLSITDLNKRFINTFLHLQGMLFTQINTEDF
YLASKSLIEQFRILIGKTPLPISVDRLVQIMALNMYSIEKTKIRAGSDSPSYRSVMQTKA
LELAGEMFSVLLERCNLLIAGGNPEDILDIQSTLQQEITPLLAAVKVWCDWLIGNNDTWY
PVVSAEPFTQLAQLATRLEAIKPTVTSVLEKCLSDETWRALPQARREEFDLIRLAEDSIL
CEFEPWFRGLDWSLYRQFSPKSVNHLCRQNAKRVDQIRMCAEVLEGLDPPVLKWSVPDNS
HVCLVTDREESTQASVARDMAEANLTALIARDEDILEECYSDKENEEQDEPVNDEIAKLR
MRKVELQKVQSEQARKAQKEILDQHVRTTLEVRPKILVPDTNAFIDHLDLIKLITVSGEF
QLVIPIVVLGELEGLCKSKDYSDRPEHGAMLRENSKLALTWIRSKPKNVKCATTKGSILS
SLGVTVEEDTRDGETNDDRILICCLNLDSSPQPRTEDGMKTVFRNTILLTDDRNLKLKAH
IQDCAVSKVGDFVSWISDKQ
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatccgagtattgcaaatgaagcagaggaaatgagaagagaagaggaacga
agaaaaagaccggatgtgcaaagatacaaacccggagcatttaaccggaaaccagaacca
ctctttccggagggaagtttcaaacccgagataagaactgttggaatagtgtcagaaagg
aacaaagagaacaggagaggggggcaaggagtaacagagcaaactggaaataaagataaa
ggaaggaaaccagagaaagaacattttgtctccaagaaggttcaggagaaggtagtgcac
gaaagtaaagatggagtgaagagtgggagcagggttgaagagaattctatcatccaggat
acaggaggaggaacgaacacccggaaaaggaagaataagaagaataaaagtaaggacaag
gataaaactatcattactgttgctgctagcgaagagaacgttgttaccaaacctactcct
ctactaaacggagatgatcataaaccagcacaagtaaagaaaccagagaaaagtcaacac
gacgatataccgactagaagtcactattcaggggcagcacaaagaaataacgggagaaaa
gatcgagataaaataacccctaaacctgataatcaggacgggaaagatcgagtgaaacag
aaccccaaatctgacaatcatgacatgaaagatcgagataagaaaaaccctaaacctgat
aaacaggacgggaaaaatcaagagaaacagaaccctaaatctgaaaaccaggatgggaaa
gatcatgtgtttcgtgtccccgatccagtatctagaaactaccaagagaaaagatcagac
cgaagaggacacgtctcagatagaagagattacaaaccatcccgagatgatcggggactc
gatttgtatgatcaaagacagggtaaacgtgagatgaatcctgaattaggagaaaggttg
gagagctggggaagaggcggaggtagaaacgagaacgggttccaaagatcagacagagga
ggagattactgttctcacagagggtttagtggatcagaacggagatcggatcgagatctc
cgaggatctggacatgggatgagaggagcagatagaaaccggtttaaccgtgacgttcct
cagggacggagtcaaggcatggattacaatctaagaggagactctgaacctaaagagaat
ggaagaacatcctggaaacaagatcaattttcccgaggtggcaggcggggaggttcccga
gggagttctcctcaacgtggaggtagaggtcgctggtcccgtggtagttcaccttcccgg
agtagcagaggaaactctccaattagagcgaactcccgtccagattcaagaaggacttct
ccgagttttcagcacagcagaactaactctccggtcagacataccagagttttcaggaaa
aataattctcctccgtcccaaagatctactgtatcccggactccaagtccacggagccga
aggaaccaggatactagagatctagatggatataccagggaccagagaaggagagatgag
ggattgtgggatccgcaaggtaaacctccttctggtcgtgtcaagtcagctcctgtaaaa
accagtctccctccgagattccaaaagactaaagagcggaaaatatcccgacgactggag
actgagacctgtcatatgtcggactggtctgtagagatggaggaggaggatgagaggaaa
tctcagctgggtttatctcctccctccggtccagggattatcagaatatctgaaccccag
accggttctgctcttgaactccgggcacaaccgatcagaccaggaacctactccgctccg
ttccatccgtcctggaaccagaccttgcctgcaaatatgagtgctgagaaagagaagttt
ttgtttgacccaagtaatcctatgaaacctataaggatgcaggatatgtcggctcgagac
aggttggataactcgtatcctgacttctcctgtcctactaatcctaacatgagatttcca
atgggagtttccaggtttaatcctccgccgcagatgtatcctccaaacatgatccctatg
catcctggacctggagctggataccaaccaccgtttcctcaacctataatgccgacgtct
ggtgtcgcgtttcatcctgcgttccatggtcctgattggtttaacgtgtttgactctaat
atctacggaagcgggaagatcgatataaatataattgtgaggatagtgtcagcagataag
aagctccgccatctagtccaaggaggtccagccgtcatctgtaatcgttgggatcaagag
gttcgggagatcagacatgaaatcatgaaagcagcgcggcttcttcttcaaactgatcta
tacttcgtgtgtgagaaggaggtggatgcgtatatctggaagagtgtttactatcaggtt
attgagatgctcaagttctcattcttcgatacggagaatactaccccggagactaaacag
gttcttaaatcccagctcctgatcatactggaggaaggggtagactactttactcagcta
ctcaaggatataggagatcagtatcatgtagatctggatagattctatgatgttctggaa
cctagagatctagacaaaaccgggagacttgcattaataatctgccagaaactgctgctg
tatctgggtgaccttgcgcgctacaaggagcaggtcaactcgacctcaaactacggaagg
gcgagacaatactatcagaaggcgaaccatctggatatgcggaacggacgcccttttaat
atgctcgccatcctcgctaaactttcaaataggaagtttgaggcagtttactacaatata
aggtgcttgatgtcccgaaacccgttcaccccatcgagcaaagaagggctcagtgtcatc
ttcgatgagatgaagagaaggtgggagctgggggagaagcagaagctggacaagaaggtc
gaggagagcgataaaacaaacggttctttgctgatcaaagggagccgggttagaagagag
atatggatccgaggtgaagcaggacggagattacatagaaccacatcagcaactgcaacc
tcggagtctctatcctgtgatcttgaaaacctctctattactgatttaaacaagagattc
ataaacaccttcctccatctccagggtatgctttttacacaaatcaacacagaggatttc
taccttgcttcgaagagtttaatcgaacagtttagaatactgatcgggaaaactccgctt
cctatctccgttgataggttggttcagatcatggctctcaatatgtacagtattgagaag
acgaagattagagcaggttcagattctccgtcctacagatccgtcatgcaaaccaaggct
ttggagctggcaggagagatgttttccgttctactagagagatgcaatcttttgattgcc
ggtggaaacccagaggatatcctggatattcagagcactctacaacaggagataactccg
ctcctagcagctgtcaaggtctggtgtgactggttgataggaaacaatgacacctggtat
cctgtagtatctgccgaacccttcacacaactagcccagctcgcgaccagactcgaagcc
attaaacctaccgtaacctctgttctggagaaatgtttgtctgatgagacctggagagcg
ctgccccaggctcgacgtgaggagtttgatcttattcgactagcagaggattcaatcctg
tgtgagttcgaaccttggttccgtggattagactggagtctataccgacagttcagtcct
aaatccgtaaaccatctgtgcagacagaatgctaagcgtgttgaccagatccgtatgtgc
gccgaggttctagaaggattggatccccctgtgctcaagtggtctgttcctgataacagt
catgtatgtttagtaacagaccgggaggaatctactcaggccagtgttgctcgagatatg
gctgaagcaaaccttaccgctctcattgctcgagacgaggatatacttgaagaatgctac
agtgataaagagaacgaggagcaggatgaaccagtcaatgatgagattgctaaactcagg
atgcgaaaggttgagttgcagaaggttcagagtgagcaggcaaggaaagctcagaaggag
attctggatcagcatgtaagaacaacactagaggttcgaccaaagatcctggttcctgat
accaacgcttttatcgatcatcttgacttgattaagctgataactgtttcaggagagttc
cagcttgttattcctattgtggtgcttggagagttggaaggtttatgtaagagcaaggat
tactctgaccgaccggagcacggagcaatgctccgagagaatagtaaacttgctctcacc
tggattcgatctaaaccgaaaaacgtaaaatgtgcaactaccaaagggagtattctaagc
agtcttggtgtaacagtggaggaagatacacgggatggagaaaccaacgatgaccggata
ctcatctgttgtctcaacctcgactcatccccccagccacggactgaggacgggatgaaa
actgttttcaggaatactattctacttacagatgacagaaacctcaaactgaaagcacac
atacaagactgcgctgtgagcaaagttggtgattttgtctcctggatatctgataaacaa
tga
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integrated database retrieval system
