Eurytemora carolleeae: 111711126
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Entry
111711126 CDS
T07296
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
eaf
Eurytemora carolleeae
Pathway
eaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111711126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eaf03041
]
111711126
Spliceosome [BR:
eaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111711126
Complex C
U5 SnRNP specific factors
111711126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
Roc
MMR_HSR1
EF-G_D2
Septin
Ras
Motif
Other DBs
NCBI-GeneID:
111711126
NCBI-ProteinID:
XP_023341156
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDPDLYDEFGNYVGPDLESEEDSSSDEEKDRDEEEAMQGDEEQDEEDEPSAQSMAIVLHE
DKKYYPTAGEVFGPGVETIVHEEDTQPITKPIIEPVKKNKFEHVEQELPRTTYQIEFLAD
LMDNSNLIRNVALVGHLHHGKTSFVDCLMQQTHPDLQSKDDKPVRYTDTLFTEQERGVSI
KAMPVSLVCQDVRDKSFLLNVFDTPGHVNFSDEVTASMRLADGVCVFIDAAEGVMLNTER
VIKQAVQEKLAVTVCINKIDRLMLELKLPPQDAYYKLRHIVEEVNGLISLYSEDESIQVL
SPIQGNVCFASSQYGACFTLKSFAALYNSTYGNINVNEFARRLWGDIYFNSKTRKFSKKP
PHGSAQRSFVEFILEPLYKLFAHVVGDVDTCLPGLCQELGVRLTKEESKMNIRPLLRLIC
SRFLGNFTGFTDMCVEHIPSPLDNAKMKVDQIYSGTNETERYEDMVACDQDGRLMVHTTK
QYPTEDTTCFHVLGRVMSGTLHSGQEIRLLGENYTVFDEEDSRSLRVGRLWIYEARYKIE
VNRVPAGNWVLIEGIDQAIVKTSTITDLQGNEELYIFRPLKFNTQSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKLYSEIDIKVADPVV
SFCETVVETSSLKCFAETPNKKNKMTMIAEPLEKGLSEDIENEVVSITWNKKRLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKGLLGSVKESIVQGFQWGTREGPLC
EEPIRNVKFKILDAVIANEPIHRGGGQIIPTSRRVAYSAFLMATPRLMEPYLFVEVSAPA
DCVSAVYTVLARRRGHVTQDAPVPGSPLYIIKAFIPAIDSFGFETDLRTHTQGQAFCLSV
FHHWQIVPGDPLDKSITIRPLEPQPATALAREFMVKTRRRKGLSEDVSINKFFDDPMLLE
LARQDVMLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgatctatacgacgagtttggaaattatgttggacccgaccttgagtccgag
gaagactccagcagtgacgaagagaaggaccgggacgaggaggaggccatgcagggggac
gaggagcaggatgaggaggacgaaccctcagctcagtccatggcaatagtgctccacgag
gataagaagtattatccaactgccggagaagttttcggacctggtgttgagacaatagtc
catgaggaggatacccagcctatcaccaaacctatcattgaacccgtgaagaagaacaag
ttcgagcacgttgagcaggagctgcccaggactacttaccagatagagttcctcgctgat
ctcatggataacagtaatctgattcgtaatgttgctctggtgggacatcttcatcacggg
aaaacatccttcgttgattgtctgatgcagcaaacccatcctgatcttcaatctaaggat
gacaaacctgtccggtacacagatactctctttacagaacaagaacgtggagtttcaatc
aaggccatgcctgtatccctggtctgccaggacgtcagggacaaatccttccttctcaat
gtattcgatactcccggccacgtcaacttctccgacgaggtgaccgccagtatgcgcctg
gcggacggcgtatgcgtgtttatcgacgcggcggagggtgtgatgttgaacacagagcgg
gtgatcaagcaggcggtccaggagaagctggcggtgaccgtgtgtatcaacaagatagat
cgacttatgctggaacttaaacttccgccccaggatgcgtactacaagctgcgtcatata
gtggaggaggttaacggcctcatcagcctctactcggaggatgaatctattcaagttcta
tctccaatccaaggaaatgtatgttttgctagttcccaatacggagcctgcttcacactc
aaatccttcgctgctctgtacaactctacctacgggaacatcaacgtgaacgagttcgct
agacggctctggggggacatctacttcaactccaagacgaggaagttctctaagaaacct
cctcatggttccgcgcagagaagctttgttgagtttatccttgaacctctctacaagctg
tttgctcatgttgttggagatgttgatacctgtctgccaggactctgtcaggagctggga
gtaaggttgactaaggaggagagtaagatgaatatccgacctttactccgtctcatctgc
tccaggttcctcgggaactttacagggttcacggatatgtgtgtggaacatattcctagt
cctctagataatgctaagatgaaggttgatcagatctacagcggaaccaacgaaacggag
aggtacgaggatatggtggcctgtgaccaggatggtcgactcatggtacacaccaccaaa
cagtaccctactgaggatacaacttgtttccatgttctcggacgggttatgagcggaact
ctgcattcaggacaagagattcgtctgttgggagagaactacacagtatttgacgaagaa
gacagcagaagccttcgagttggtcgtctttggatctatgaagctaggtacaaaattgaa
gtcaaccgtgtccccgccggtaactgggttctgatcgaaggaatcgatcaagcaatcgtc
aagacatcgaccatcactgacttgcagggcaacgaggagctctacatcttccgccccttg
aagtttaacacccagtccgtgataaagattgctgtagagcctgtgaaccccagtgagctt
ccgaagatgttggacggtttgagaaaggtaaacaaatcttatcccttgctctccacaagg
gtagaggagtcaggtgagcatgtgatcctgggaactggagaactttacctcgactgtgtt
atgcacgatctcagaaaactatattcagagatcgacatcaaggttgctgatcctgtcgtc
tccttctgcgagactgtggtcgaaacttccagtttgaaatgtttcgccgagaccccgaac
aagaagaacaagatgacaatgattgctgaaccgttggagaagggtttatctgaggatatt
gagaacgaggttgtatctatcacgtggaataagaagagattaggagaatttttccaaacc
aaatatgactgggatttacttgccgcaagatctatctgggcctttggtcctgatgcaacc
ggaccaaatatattggtggacgacacactcccctccgaggtggacaagggactgctagga
tccgtcaaggagagtatagttcaaggtttccagtggggtactagagaaggaccgttatgc
gaggaaccgatcagaaatgtcaagtttaagatcctcgacgcagtgatcgccaacgaaccg
attcatcgcggcggtggtcagattatcccaacctcaagaagggtagcatactccgccttc
ctcatggctacacctagactcatggaaccctatctgtttgttgaggtatccgccccggcg
gattgtgtatctgctgtatataccgtgctcgctagacggcgaggtcacgtgacccaagat
gctcctgtacctggttccccactgtacatcattaaggcatttatccccgccatcgactca
ttcgggtttgagacggatctccgaacccatactcagggtcaagcattctgtttatcagta
ttccaccactggcagattgtacccggagatcccctggataaatccatcacaatccgtccc
cttgaaccccaacccgccacagccctagccagggagttcatggtgaaaacgaggagaagg
aagggtctctctgaggacgtctccatcaacaagttcttcgatgatcctatgttgttggag
ttggcccgacaggatgttatgctaaactatccgatgtaa
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