Equus asinus (ass): 106821978
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Entry
106821978 CDS
T04645
Symbol
SMG6
Name
(RefSeq) telomerase-binding protein EST1A isoform X3
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
eai
Equus asinus (ass)
Pathway
eai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106821978 (SMG6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eai03019
]
106821978 (SMG6)
03032 DNA replication proteins [BR:
eai03032
]
106821978 (SMG6)
Messenger RNA biogenesis [BR:
eai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
106821978 (SMG6)
mRNA cycle factors
Common to processing body (P body) and stress granule
106821978 (SMG6)
DNA replication proteins [BR:
eai03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
106821978 (SMG6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
DUF5539
Motif
Other DBs
NCBI-GeneID:
106821978
NCBI-ProteinID:
XP_014682373
UniProt:
A0A9L0IH47
LinkDB
All DBs
Position
13:18984474..19197340
Genome browser
AA seq
1411 aa
AA seq
DB search
MTLLAAVRELVSMSGDEECGRNCFLFASTGENVKEPRQRKDNRRPDLEIYKPGLSRLRNK
PKIKEISGSDEFKDEIVNDRDSSTVGNGTQLTKDVCKELDNQQQNGPLDPENIRAQESFP
RTAGQEDRSLRIIKRTKKPDMQIYQPGRRLQTVTKESSSRVDEEEILNQVEQLRVEEDDC
RGNVKEEVVNKEETEKSLNGDRVRATKGEKGRRVEKGEGIKKVNDDLAQGKPGSVKRYSR
SDKRRNRYRTCSTSSAGSNNSAEGAGLTDNGCRRRRQDRTKERPRLKKQVSMSSTDSLDE
DRIDEPDGPRRSSERRKHLDRSWSGRGEGEQKSNGKENRGALRVTFDAETMNKDSPLLRS
AREDVDRIKPDKGLSSGGKGCEKQESKNLKQELRGRGRGILILPAHTTLSVNSAGSPEST
PLGPRLLFGSGSKGSRSWGRGGTTRRLWDPNNPDQKPALKSQTPQLHFLDTDDEVSPTSW
GDSRQAQASYYKFQNSDNPYYYPRTPGPASQYPFTGYSPLQYPVGPTNGVYPGPYYPGYP
TPSGQYVCGPLPASTMSPEDMEQHMRNMQQQELHRLLRVADNQELQLSNLLSRDRISPEG
LEKMAQLRAELLQLYERCILLDIEFSDNQNVDQILWKNAFYQVIEKFRQLLKDPNVENPE
QIRNRLLELLDEGSDFFDSLLQKLQVTYKFKLEDYMDGLAIRSKPLRKTVKYALISAQRC
MICQGDIARYREQANDTANYGKARSWYLKAQHIAPKNGRPYNQLALLAVYTRRKLDAVYY
YMRSLAASNPILTAKESLMSLFEETKRKAEQMEKKQHEELELSPDQWRKGKKSTFRHVGD
DTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGSLSPSDLNKRFILSFLHAHGKLFTRIG
METFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLMTINMFAVHNSQLKDCFSEECRSVIQ
EQAAALGLAMFALLVRRCTCLLKESAKAQLSSPEDEDDQDDIKVSSFVPDLKELLPSVKV
WSDWMLGYPDTWNPPPTSLDLPSRVAVDVWSMLADFCNILTAVNQSEVPLYKDPDDDLTL
LILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAADCKRVTVLKYFLEALCGQEEPLLAF
KGGKYVSVAPVPDTMGKEMGSQEGKQLEDEEEDVVIEDFEEDSEAEGSGGEDDIRELRAK
KLALARKIAEQQRRQEKIQAVLEDHSQMRQMELEIRPLFLVPDTNGFIDHLASLARLLES
RKYILVVPLIVINELDGLAKGQETDHRAGGYARVVQEKARKSIEFLERRFESRDSCLRAL
TSRGNELESIAFRSEDITGQLGNNDDLILSCCLHYCKDKAKDFMPTNKEEPIRLLREVVL
LTDDRNLRVKALTRNVPVRDIPAFLTWAQVG
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgactctgctggctgctgttagagagttggtgagcatgagtggagatgaagaatgtgga
aggaactgcttcctgtttgcttcaacaggagaaaatgtgaaggagcccaggcagcggaaa
gataacaggcgcccagatctggaaatctataaacctggtctttctcgactaaggaacaaa
cctaaaatcaaggaaatctctgggagtgatgaatttaaggacgaaattgttaatgacaga
gattcttctactgttggaaatggtacacagctcactaaagacgtctgtaaagaactggac
aaccaacagcaaaatggtcctttagacccagaaaatatccgggcacaggaatccttccca
aggactgctggacaagaggatcgaagtctaagaattatcaagagaacaaagaaacctgat
atgcagatctatcagcctggaaggcgtttgcagactgttaccaaagaatcatctagccgg
gtagatgaggaagaaatcctcaaccaggtggaacaactgagagtagaggaagatgattgt
aggggaaatgtgaaagaggaggttgtgaataaagaggagacagagaagagcctaaatggt
gacagagtaagggctacaaagggagagaaaggaaggagggttgaaaaaggggaggggata
aagaaagtcaatgatgacctggcacagggaaagccaggttctgtgaagcgctactctcgc
tcagacaaacgaaggaaccgctaccgcacttgcagtaccagctccgctggtagcaacaac
agtgctgagggggctggcctgactgataatggatgtcgccgccgccgccaggatcgaacc
aaggagaggccacgactgaagaagcaagtgtctatgtcctcaactgactccttagatgag
gacagaattgatgagcctgatgggcccaggaggagctcagaaaggaggaaacatttagat
agaagctggtctggccgtggagagggagagcagaaaagcaatggtaaagaaaatcgaggc
gctcttcgtgttacttttgatgcagaaaccatgaacaaagattccccactgctgaggtca
gccagggaggatgtggataggataaagcctgacaaaggcttgagcagtggaggcaaaggc
tgtgagaagcaggagtctaaaaacctgaaacaagaacttcggggtcgtggccgtggcatt
ctgattctgcctgcccataccaccctgtctgtcaattcagctggttctccagagtctaca
cccttgggacctcggcttttatttggatctggtagtaagggatctcggagttggggccga
ggaggcaccactcgacgattgtgggacccaaacaatcctgatcagaaacctgctctaaag
agccagacaccccagctacatttcttggacactgatgatgaagtcagtcccacatcttgg
ggtgactcacgccaggcccaagcatcttactataagtttcaaaactctgacaacccctat
tactacccccggacaccaggcccagcctcccagtatccttttacaggctatagccctctg
cagtaccctgtgggccctacgaatggtgtgtacccagggccttactacccaggctatcca
actccatcaggacagtatgtttgtggccctctccctgccagcaccatgagtcctgaggat
atggagcagcacatgaggaacatgcagcaacaggagctacataggcttctccgggtggcc
gacaaccaggaactgcagctcagcaacctgctttccagggaccgcatcagtcctgagggc
ctggagaagatggctcagctcagagctgaactgctgcagctatatgagcgctgtattcta
ttagatattgagttctctgataatcagaatgtggatcagatcctgtggaagaatgctttc
tatcaggtgattgagaagttcaggcagcttctcaaggatccaaatgttgagaacccagaa
cagattcggaacagacttttggagctgttggatgagggtagtgacttctttgatagtttg
cttcagaagctgcaagttacttacaagttcaaactggaggactacatggacggtcttgcc
attcgcagcaagccattacgcaagacagtaaaatatgccttgatcagtgcacaacgatgt
atgatttgccaaggagatattgctaggtatcgggagcaagcgaatgatacagcaaactat
gggaaagctcgcagttggtacctgaaggcccagcacattgctcccaagaatggacgtccc
tataaccagttggctctcctggcagtgtatacgaggaggaagcttgatgctgtgtattac
tatatgcgcagtttagctgccagcaatcctatcctgactgccaaggagagtctcatgagt
ttgtttgaagagaccaaacgaaaggccgaacagatggaaaagaagcaacatgaggagttg
gaactgagccctgaccaatggcggaaaggaaagaagtctactttccggcatgttggagat
gacacgactcgcctggagatctggattcatccatcccatcctcggtcctcccagggcact
gagtctgggaaggattctgagcaggagaatgggctaggcagcctgagccccagtgatctg
aacaaaaggttcatcctcagttttctccatgcccatgggaagctgtttacccggattggg
atggagacattccctgcagtggctgagaaggtcctcaaggagttccaggtgttactgcag
catagtccctctcctattggcagtacccgtatgctgcagcttatgaccatcaacatgttt
gctgtacacaactcccagttgaaagactgcttctcagaggagtgtcgctcggtgatccag
gagcaagccgcagccctgggtttggccatgtttgctctcctggtgcggcgctgcacctgc
ttacttaaggagtctgccaaagctcagctgtcctctcctgaggatgaggatgaccaagat
gacatcaaggtctcttccttcgtcccggacctgaaggaactgctccccagtgtgaaagtc
tggtcagactggatgctcggctacccagacacctggaatcctccacccacatccctggat
ctgccctcacgggttgctgtggatgtgtggtcgatgctggctgatttctgtaacatattg
actgcggtgaatcagtctgaggtgccactatacaaggacccggacgatgacctcactctt
cttatcctggaagaggatcgacttctctcgggctttgtccccttgctggctgcccctcag
gacccctgctacgtggagaaaacctcggataaggttattgcagccgactgcaaaagggtc
acagtgctgaagtattttctggaagccctttgtggacaagaagagcctctgctggcattc
aagggtggaaaatatgtgtcagtggcacccgtcccagacaccatgggaaaggaaatggga
agccaagagggaaaacaactggaagatgaggaggaggacgtggtgattgaagactttgag
gaagattcagaggctgaaggcagcgggggcgaggatgacatcagggagcttcgggccaag
aagctggctctggccaggaagatagctgagcagcagcgtcgccaagaaaagatccaggct
gtcctggaggaccacagtcagatgaggcagatggagctcgagatcagacccttgttcctc
gtaccagacaccaacggcttcattgaccacctggccagtctggcacggctgctggagagc
aggaagtacatcctggtggtgcccctcatcgtgatcaatgagctggacggcctggccaag
ggacaggaaacagaccaccgggctgggggctatgcccgggtggtgcaggaaaaggcccgg
aagtccatcgagttcctcgagcggcgattcgagagtcgggactcttgcctacgggctctg
actagccgtggcaatgaactggaatccatcgccttccgcagtgaggacatcactggccag
ctgggtaacaatgatgacctgatcctctcctgctgcctccactactgcaaagacaaggct
aaggacttcatgcccaccaacaaagaggagccaatccggctactgcgggaggtggtgctg
ttgacggatgaccggaacctgcgtgtgaaggcactgacgaggaatgtgcctgtgcgggac
atcccagccttcctcacgtgggcccaggtgggctga
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