Equus asinus (ass): 106837480 Help Entry 106837480         CDS       T04645                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism eai  Equus asinus (ass) Pathway eai04010   MAPK signaling pathway eai04064   NF-kappa B signaling pathway eai04120   Ubiquitin mediated proteolysis eai04140   Autophagy - animal eai04144   Endocytosis eai04380   Osteoclast differentiation eai04620   Toll-like receptor signaling pathway eai04621   NOD-like receptor signaling pathway eai04622   RIG-I-like receptor signaling pathway eai04657   IL-17 signaling pathway eai04722   Neurotrophin signaling pathway eai04936   Alcoholic liver disease eai05132   Salmonella infection eai05133   Pertussis eai05135   Yersinia infection eai05140   Leishmaniasis eai05142   Chagas disease eai05145   Toxoplasmosis eai05152   Tuberculosis eai05160   Hepatitis C eai05161   Hepatitis B eai05162   Measles eai05168   Herpes simplex virus 1 infection eai05169   Epstein-Barr virus infection eai05170   Human immunodeficiency virus 1 infection eai05171   Coronavirus disease - COVID-19 eai05200   Pathways in cancer eai05222   Small cell lung cancer eai05235   PD-L1 expression and PD-1 checkpoint pathway in cancer eai05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:eai00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     106837480 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     106837480 (TRAF6)    04064 NF-kappa B signaling pathway     106837480 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     106837480 (TRAF6)    04140 Autophagy - animal     106837480 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     106837480 (TRAF6)    04621 NOD-like receptor signaling pathway     106837480 (TRAF6)    04622 RIG-I-like receptor signaling pathway     106837480 (TRAF6)    04657 IL-17 signaling pathway     106837480 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     106837480 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     106837480 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     106837480 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     106837480 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     106837480 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     106837480 (TRAF6)    05161 Hepatitis B     106837480 (TRAF6)    05160 Hepatitis C     106837480 (TRAF6)    05171 Coronavirus disease - COVID-19     106837480 (TRAF6)    05162 Measles     106837480 (TRAF6)    05168 Herpes simplex virus 1 infection     106837480 (TRAF6)    05169 Epstein-Barr virus infection     106837480 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     106837480 (TRAF6)    05135 Yersinia infection     106837480 (TRAF6)    05133 Pertussis     106837480 (TRAF6)    05152 Tuberculosis     106837480 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     106837480 (TRAF6)    05140 Leishmaniasis     106837480 (TRAF6)    05142 Chagas disease     106837480 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     106837480 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     106837480 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:eai04131]     106837480 (TRAF6)    04121 Ubiquitin system [BR:eai04121]     106837480 (TRAF6) Enzymes [BR:eai01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      106837480 (TRAF6) Membrane trafficking [BR:eai04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     106837480 (TRAF6) Ubiquitin system [BR:eai04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     106837480 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 SlyX U-box zf-RING_11 Spc29 DUF4455 EzrA DUF3450 DUF16 Myosin_tail_1 UPF0242 DUF7310 Sina_ZnF ATG16 CENP-F_leu_zip Motif Other DBs NCBI-GeneID:  106837480 NCBI-ProteinID:  XP_014706509 UniProt:  A0A9L0JZF5 LinkDB All DBs Position 17:complement(28500289..28524046) Genome browser AA seq 541 aa AA seqDB search MSLLNCENSCGSSQTESDCCAAMASSCSAAAKDDSVSGTASTGNLSSSFMEDIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNGGCLHKMELRHLEDHQAHCEFALMNCPQCQHPFQKCQLNIHMLK ECPRRQVSCVNCAVSMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI PCTFNTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVQSLSLALAPAPQRDMLPYDSAPL SRVSSGCYPEVRNFQETIQQLEGRLVRQDHQIRELTAKMETQSIYVSELKRTIRTLEDKV AEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ RCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPIRQNHEEIMDAKPELLAFQR PTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDTG V NT seq 1626 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaatagctgtggatccagccagactgaaagtgactgctgt gcagccatggccagctcctgtagtgctgcggcaaaagacgacagtgtgagtggaactgcc agcacggggaatctctccagctctttcatggaagatatccagggatatgatgtggagttt gacccacccctggagagcaagtatgaatgtcccatctgcttgatggcgctgcgggaagca gtgcaaacaccgtgcggccataggttctgcaaagcctgcatcatcaagtcaataagggat gcaggtcacaaatgtccagtcgacaatgaaatactgctggaaaatcaactatttcctgac aattttgcaaaacgagagattctttctctgatggtgaaatgtccaaatggaggttgtttg cacaagatggaactgaggcatcttgaggatcatcaagcacattgtgaatttgctcttatg aattgtccccagtgccagcatcccttccaaaaatgccaacttaatattcacatgctcaag gagtgtccaaggagacaggtttcttgtgtaaactgtgctgtatcgatggcatttgaagat aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatattgcaatacc atgctcatcagagaacagatgcctaatcattatgatctagactgtcctacagccccaatt ccatgcacgttcaatacttttggttgccacgaaaagatgcagaggaatcacttggcacgc cacctgcaagagaacacccagtcgcacatgagaatgttggcccaggctgtccagagttta agccttgccctagctcccgcacctcaacgggacatgctcccatatgattctgcccctctg tcccgggtgtcctctgggtgttacccagaggtccggaatttccaagaaaccattcagcag ttagagggtcgccttgtaagacaagaccatcaaatccgggagctgacagcgaaaatggaa actcagagcatatatgtaagtgagctcaaacgaactattcgaacccttgaggacaaagtt gctgaaatagaagcacagcaatgcaatggcatttatatctggaagattggcaactttggg atgcacttaaaatctcaagaagaggagaagcccgttgtcattcatagccctggattctac acaggcaaacctggatacaaactgtgcatgcgcctgcacctccagttacccaccgctcag cgctgtgcaaactatatatccctctttgtccacacgatgcaaggagagtatgacagccac ctcccttggcccttccagggtacaatacgccttacaattcttgatcagtctgaagcaccc ataaggcaaaaccatgaagagataatggatgccaaaccagagctgcttgccttccagaga cccacaatcccacggaatccaaaaggttttggctatgtgactttcatgcatctggaagct ctaagacaaagaaccttcattaaggatgatactttgttagtacgctgtgaagtctctacc cgcttcgacatgggcagccttcggagggagggttttcagccacgaagcactgataccggg gtatag

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