Equus asinus (ass): 106839994
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Entry
106839994 CDS
T04645
Symbol
KDM1A
Name
(RefSeq) LOW QUALITY PROTEIN: lysine-specific histone demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
eai
Equus asinus (ass)
Pathway
eai04714
Thermogenesis
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
106839994 (KDM1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eai03036
]
106839994 (KDM1A)
Enzymes [BR:
eai01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
106839994 (KDM1A)
Chromosome and associated proteins [BR:
eai03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
106839994 (KDM1A)
REST complex
106839994 (KDM1A)
Histone demethylases
106839994 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
FAD_oxidored
HI0933_like
FAD_binding_3
Thi4
GIDA
2-Hacid_dh_C
MutS_IV
Sec10_N
Pyr_redox_3
Lycopene_cycl
Motif
Other DBs
NCBI-GeneID:
106839994
NCBI-ProteinID:
XP_014710583
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All DBs
Position
5:18578928..18638331
Genome browser
AA seq
951 aa
AA seq
DB search
MDELCGKHAARTPLYGGGGGRAAGASAFLSRRRGSALGACVRGGGWRRADCVRRGDAAPA
PRTDGPSGPRGRRRPGGPRCCPGKKAAAAAAAAAAAAAGAEAGSGAAGGAENGSEVAAPP
AGLSGPAEGGPGAAGERTPRKKEPPRASPPGGLAEPPGSAGPQAGPTVVPGSATPMETGI
AETPEGRRTSRRKRAKVEYREMDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPQAPPE
EENESEPEEPSGQAGGLQDDSSGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIIS
GPQQTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVLVHRVHSYLERHGL
INFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVATFR
KGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQE
FNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEEL
KELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQ
GKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFT
GSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAV
LCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHV
GSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVP
QPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPGPSIPGAPQPIPRLFFAGE
HTIRNYPATVHGALLSGLREAGRIADQFLGAMYTLPRQATPGVPAQQSPSM
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactttgtggaaagcatgccgcgaggacgccgctctatggcggcgggggaggg
cgggccgcgggagcctcggcctttttgtcccgacgccgcgggagcgcgctcggcgcgtgc
gtgcgcggcggcggttggcggcgcgcggactgcgtgaggcgaggcgacgcggccccggcc
ccacggaccgacggaccgagcggccctcgcggccgtcggcggccaggcggcccgagatgt
tgtcctggaaagaaggcggcggcggcggcggcggcagcggcggcggcggcggccggggcg
gaggccggctccggggccgcgggcggcgcggagaacggctcggaggtggccgcgccgccc
gcgggcctgtcgggccctgccgagggcgggccgggggcggccggggagcgcacgccccgc
aagaaggagcctccgcgggcctcgccgcctgggggcctggccgagccgccgggatccgcc
gggccgcaagccgggcctaccgtggtgcctggatctgcgacccccatggaaacgggcatc
gcggagactccggaggggcggcgcaccagccggcgcaagcgggcgaaggtagagtacaga
gagatggatgaaagcttggcgaacctctcagaagatgaatattattccgaagaagagaga
aatgctaaagctgagaaggaaaagaagcttcccccaccaccccctcaagccccacctgag
gaagaaaatgaaagtgagcctgaagaaccatctgggcaagcaggaggacttcaagacgac
agttctggagggtatggagacggccaagcatcaggtgtggagggtgcagctttccagagt
agacttcctcacgaccggatgacatctcaggaagcagcctgtttcccagacatcatcagt
ggcccacagcagacccagaaggtttttctgttcattagaaaccgcacattgcagttgtgg
ttggataatccaaagattcagctgacatttgaggctactctccagcaattagaagcacct
tataacagtgatactgtacttgtccaccgagttcacagttatttagagcgtcatggtctt
atcaacttcggcatctataagaggataaaacccctcccaactaaaaagacaggaaaggta
attattataggctctggcgtctcaggcttggcagcagctcgtcagttacagagttttgga
atggatgtcacacttctagaagccagggatcgtgtgggtggacgagttgctacctttcgc
aaaggaaactacgtagctgatcttggagccatggtagtaacaggtcttggagggaatccc
atggctgtggtcagcaaacaagtaaatatggaactggccaagatcaagcagaaatgccca
ctttatgaagcaaatggacaagctgttcctaaagagaaagatgaaatggtagagcaagag
tttaaccggctgctagaagctacatcttaccttagccatcaactagacttcaatgtcctc
aataataagcctgtgtcccttggccaggcattagaagtcgtcattcagttacaagaaaag
cacgtcaaagatgagcagattgaacattggaagaagatagtgaaaactcaggaggaattg
aaagaacttcttaataagatggtaaatttgaaagagaaaatcaaagaactccatcagcaa
tacaaagaagcgtctgaagtcaagccacccagagacatcactgctgagttcttggtgaaa
agcaaacacagagatctgaccgctctctgcaaggaatatgatgaattagctgaaacacaa
ggaaagctagaagaaaaacttcaagaattggaagccaatcccccaagtgatgtatacctg
tcgtcaagagacagacagatacttgattggcattttgcgaatcttgaatttgctaatgct
acacctctttctacgctctcccttaaacattgggatcaggatgatgactttgagtttact
ggcagccaccttacagtgcggaatggctactcctgtgtgcctgtggctttagcagaaggc
ctagacattaaactgaacacggcagttcgacaggttcgctacacagcttcaggatgtgaa
gtgatagctgtgaatacccgctccacaagccaaacctttatttataaatgtgatgcagtt
ctctgtacccttcccttgggtgtgctgaagcagcagccaccagctgttcagtttgtgcca
cctcttcctgaatggaaaacctctgcagtccaaaggatggggtttggcaaccttaacaag
gtggtgttgtgtttcgaccgggtgttctgggatccaagtgtcaatttgtttgggcatgtt
ggcagtaccactgccagcaggggtgagctcttcctcttctggaacctctataaagctcca
atactgttggcactagtggcaggagaagccgccggcatcatggaaaacataagtgatgat
gtgattgttggccgatgcctggccattctcaaagggatttttggtagcagtgcagtgccc
cagcccaaggaaactgtggtgtctcgctggcgcgctgatccctgggcccggggctcctat
tcctatgtagctgcaggatcatctggaaacgactatgatttaatggctcagccaatcact
cccggcccctcaatcccaggtgccccgcagccaattccacgactcttctttgctggagaa
catacaatccgtaactacccagctacagtccatggtgctctgttgagtgggctgcgagaa
gcaggaaggattgcagaccagttcttgggggccatgtacaccctgcctcgccaggccaca
ccaggcgtccctgcacagcagtccccaagcatgtga
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