Equus asinus (ass): 106842217
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Entry
106842217 CDS
T04645
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
eai
Equus asinus (ass)
Pathway
eai03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
106842217 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eai03000
]
106842217 (KDM2B)
04121 Ubiquitin system [BR:
eai04121
]
106842217 (KDM2B)
03036 Chromosome and associated proteins [BR:
eai03036
]
106842217 (KDM2B)
Enzymes [BR:
eai01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
106842217 (KDM2B)
Transcription factors [BR:
eai03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
106842217 (KDM2B)
Ubiquitin system [BR:
eai04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
106842217 (KDM2B)
Chromosome and associated proteins [BR:
eai03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
106842217 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
106842217 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
Motif
Other DBs
NCBI-GeneID:
106842217
NCBI-ProteinID:
XP_044631849
LinkDB
All DBs
Position
8:complement(46465933..46584848)
Genome browser
AA seq
1330 aa
AA seq
DB search
MNERQRLPVSSGLKRLWSGCISCTCVCMWGVHIFESRSLKAVQSVQRPIDRQRYDENEDL
SDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYVQREALRVPLIFREKDGLGI
KMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFVRYYETPEAQRDKLYNVISL
EFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQTEATNAIAEMKYPKVKKYCLMSVKG
CFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQ
RIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRY
PFYYEMCWYVLERYVYCVTQRSYLTQEYQRESMLIDAPRKPSIDGFSSDSWLEMEEESCE
QQPQEEEKEEEEEEEGADKAPKPPADGPASPTSTPSEDQEAPGKKPKAPAMRFLKRTLSN
ESEESVKSTTVPIDYPKTPTGSPTTEVSAKWTHLTEFELKGLKALVEKLESLPENKKCVP
EGIEDPQALLEGVKNVLKEHAEDDPSLAITGVPVVTWPKKTPKNRAVGRPKGKLGPASAV
KLAANRTTAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPV
LPHTAVCLVCGEAGKEDTVEEEEGKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPN
CWECPKCNHAGKTGKQKRGPGFKYASNLPGSLLKEQKMNRDNKEGQEPAKRRSECEEAPR
RRSDEHPKKVPPDGILRRKSDDVHLRRKRKYEKPQELSGRKRASTLQTSPGSSSHLSPRP
PLGSSLSPWWRSSLTYFQQQLKPGKEDKLFRKKRRSWKNAEDRMALANKPLRRFKQEPED
DLPEAPPKTRESDHSRSSSPTAGPSTEGAEGPEEKKKVKIRRKRRLPNKELSKELSKELN
QEIQKTENSLANENHQPIKSEPESENEEPKRPLGLCERPHRFSKGLNGTPRELRHQLGPG
LRSPPRVISRPPPSVSPPKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFS
YLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNHCKSITPLMLSGIIRRQPVSLDLSWTN
ISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLL
SPPTDNRPGQMDNRSKLRNIVELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQS
INLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFFKRCGNICHIDLRYCNARKAAMSVSVK
LEEKLLQKLS
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaggcaacgtcttccggtcagctcgggtctgaaaaggctctggtctggctgt
atttcctgtacctgtgtgtgtatgtggggggtccatatctttgagtcccggagtttaaaa
gctgtgcagtccgtacagcgcccgattgaccgccagagatacgacgagaacgaggacttg
tcggacgtggaggaaatcgtcagcgtccgcggcttcagcctggaggagaagctgcgcagc
cagctgtaccagggggacttcgtgcacgccatggagggcaaagatttcaactatgagtac
gtgcagagagaggctctcagggttcctctgatatttcgagaaaaggatggactaggaatt
aagatgcctgaccctgatttcacggtccgagatgtcaaactcctagtgggtagccggcgg
ctggtggacgtgatggatgtgaacacccagaagggcacggagatgagcatgtcccagttt
gtgcggtactatgagacgcccgaggctcagcgggacaagctgtacaacgtcatcagcctc
gagttcagccacaccaagctggagcacttggtcaagcgtccgactgtggtggacctggtg
gactgggtggacaacatgtggccccagcacttgaaggagaagcagacagaagccacgaat
gccattgcagagatgaagtacccgaaagtgaagaagtactgtctgatgagcgtgaaaggt
tgtttcactgacttccacatcgacttcggaggcacttccgtttggtaccacgttttccgg
ggtgggaagatcttttggctgattcctccaaccctgcacaatttggcactgtatgaggag
tgggtgctgtcaggcaaacagagcgacatcttcctgggagaccgcgtggagcgatgccaa
agaattgagctgaaacagggctacacgtttttcatcccttccggttggatccatgcagtc
tacacccctgtagactctctggtattcggcggaaacatcctgcacagctttaacgtgccc
atgcagctgcggatctacgagatcgaggacagaacacgggtgcagcccaaattccgttac
cccttctactatgagatgtgctggtatgtcttggagagatacgtgtactgtgtgacccag
cggtcctacctcactcaggaataccagagagaatcaatgcttattgatgccccaaggaag
cccagcatagacggcttctcatctgattcctggctggagatggaggaggagtcctgtgag
cagcagccgcaggaggaggagaaggaggaggaggaggaggaggaaggtgcagataaggca
ccaaagccgcccgccgatggccctgcctcacccaccagcaccccttctgaggaccaggag
gcccctgggaagaagcccaaagcacctgccatgcggttcctcaaaaggactttgtctaat
gagtcagaggaaagtgtaaagtccacgacggtgcccatagactaccccaagacgcccacc
ggctctcccaccaccgaggtctcagctaaatggacccaccttaccgagtttgaattgaag
ggcctgaaagctctggtggagaaacttgaatccctcccggaaaacaagaagtgtgtcccc
gaaggcatcgaggacccccaggcactcctggagggtgtgaagaatgtcctgaaggagcac
gcggaagacgaccccagtctggccatcactggggtccccgtagtcacttggccaaagaag
actccaaagaaccgggcggtaggtcggcccaaggggaagctgggcccggcctccgcggtg
aagttggccgccaaccggacgacggcgggagctcgccggcgccggacgcgatgccgcaag
tgcgaggcctgcctgcggacggagtgcggagagtgccacttctgcaaggacatgaagaag
ttcgggggccccgggcggatgaagcagagctgcattatgcggcagtgcatcgcgccagtg
ctgccccacaccgccgtgtgcctagtatgtggcgaggcagggaaggaggacacggtggaa
gaggaagaaggcaagtttaacctcatgctcatggagtgttccatctgcaatgaaatcatc
caccctggatgccttaagattaaggagtcagagggcgtggtcaacgatgagcttccaaac
tgctgggagtgtccaaagtgtaaccatgccggcaagaccgggaaacaaaagcgtggccct
ggctttaagtatgcctcaaacctgcccggctccctgctcaaggagcagaagatgaaccgg
gacaacaaggaaggacaggagcctgccaagcggaggagtgagtgtgaggaggcgccccgg
cgcaggtcagacgagcaccccaagaaggtgccccctgacggtatcctgcgccgaaagtcg
gacgacgtgcacctgcggaggaaacggaaatacgagaagccccaagagctgagtggccgc
aagcgagcctcgacgcttcaaacgtcccccggttcctcctctcacctctcgccgaggccc
cctctaggcagcagcctcagcccttggtggagatccagtctcacttacttccagcagcag
ctaaaacctggcaaagaagataagcttttcaggaaaaagcggcggtcctggaagaacgca
gaggaccggatggctctagccaacaagcctctccggcgcttcaagcaggaaccagaggat
gatctgccggaggcaccccccaagaccagggagagcgaccactcccgctccagctccccc
acagccgggcccagcacggagggggcagagggcccagaggagaaaaagaaggtgaagata
cgccggaaacggcgactccccaacaaagagctgagcaaggagctgagcaaggagctcaac
caagaaatccagaagacggagaatagcctggccaacgagaaccaccagcccatcaagtcg
gagcccgagagtgagaatgaggagcccaagcggcccctgggcctctgtgagcgccctcac
cgcttcagcaaggggctcaacggcacgccccgggagctgcggcaccagctggggcctggc
ctgcgcagcccaccccgagtcatctcccggccccctccctccgtgtccccgcccaagtgc
atccagatggagcgacatgtgatccggcccccccccatcagccccccacctgactcactg
cccctggatgatggggcggcccacgtcatgcacagggaggtgtggatggccgtcttcagc
tacctcagccaccaagacctgtgtgtctgcatgcgggtctgcaggacctggaaccgctgg
tgctgtgataagcggttatggacccgcatcgacctgaaccactgcaagtccatcacgccc
ctgatgctgagtggcatcattcgccgacagcctgtctccctggacctcagctggaccaat
atctccaagaaacagctgagctggctcatcaaccggttacctgggctccgagacttggtg
ctgtcgggttgctcgtggatcgcagtctcagccctctgtagctccagttgtcccttgctt
cggaccctggatgtccagtgggtcgaaggactaaaggatgcccagatgcgggatctcctg
tccccacccacggataacaggccaggtcagatggacaatcggagcaagctccggaacatc
gtggagctgcgtctagcaggtctggacatcacggacgcctccttgcggctcattatacgc
cacatgcccctgctctccaagctccaccttagttactgtaaccatgttaccgaccagtcc
atcaacctgctcactgctgtgggcaccaccacccgagactccttaaccgaaatcaacctg
tcagactgcaataaggttactgaccagtgcctgtccttcttcaaacgctgtggaaatatc
tgtcatattgacctaaggtactgcaatgcaaggaaggctgcgatgtctgtgagtgtcaag
ttggaagaaaaactcctgcaaaaactgagttag
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