Equus asinus (ass): 123290139
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Entry
123290139 CDS
T04645
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin gamma-C3-like
KO
K16497
protocadherin gamma subfamily C
Organism
eai
Equus asinus (ass)
Brite
KEGG Orthology (KO) [BR:
eai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
eai04515
]
123290139
Cell adhesion molecules [BR:
eai04515
]
Cadherins
Protocadherins
123290139
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
123290139
NCBI-ProteinID:
XP_044636588
LinkDB
All DBs
Position
12:18749448..18752768
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AA seq
863 aa
AA seq
DB search
MVPEAWRSGLVSSGRVVGVLLLLGALHKASAVIRYEILEEREKGFAVGNVVTDLGLDLGS
LSTRRLRVVSGASRRFFEVNRETGEMFVNDRLDREELCGTLPSCTVTLELVVESPLELFS
AEVVIQDINDNNPAFPTREMKLEISEAVVPGTRFPLESAHDPDVGSNSLQTYELSRNEYF
ALRVQTREDSTKYAELVLERALDREREPSLQLVLTALDGGTPARSASLPILIAVLDANDN
APAFNQSLYRARVLEDAPPGTRVVQVRATDLDEGLNGEIVYSFGSHNRAGVRELFSLDLV
TGVLTIKGRLDFEDTKLHEIYIQAKDKGANPEGAHCKVLVEVLDVNDNAPEITVTSVYSP
VPEDAPLGTVIALLSVTDLDAGENGLVTCEVPPGLPFSLTSSLKNYFTLKTSAALDRETV
PEYNLSITARDSGAPSLSALTTLRVQVSDINDNPPQSSQSSYDVYVEENNLPGVPILNLS
VWDPDAPQNARLSFFLLEQGAETGLVGRYFTINRDSGVVSSLVPLDYEDQREFELTAHIS
DGGTPVLTTNISVNIFVTDRNDNAPQVLYPRPGGSSVEMLPRGTAAGHVVTRVVGWDPDA
GHNAWLSYSLLGAPNQSLFAVGLHTGQVSTARPVQDTDSPRQTLTVLIMDNGEPSLSTTA
TLTVSVTEESPEARAEFPSGSAPREQNKNLTFYLLLSLILVSVGFAVTVLGVIIFKVYKW
KQSRDLYRAPVSSLYRTPGPSLHADAVRGGLMPPHLYHQVYLTTDSRRSDPLLKKPGAAS
PLASRQNTLRSCDPVFYRQVLGAESSPPGQVRVSKSSIMIVMLFDSCTMLWKXYEVFFSD
EDIYLIMHPHFHLALPRANVVPL
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggtcccagaagcctggaggagcggactggtaagcagtgggagagtggtgggagttttg
cttctgcttggtgccttgcacaaggcttctgccgtcattcgctatgagatcctggaggaa
agagagaaaggtttcgcggtgggcaacgtggtcacagaccttggcttggatctcggcagc
ctgtcaacccgcaggctccgggtggtgtctggagctagccgaagattctttgaggtgaac
cgggagaccggagagatgttcgtgaacgaccgtctggatcgagaggagctttgtgggacc
ctgccttcctgcaccgtaactctggagttggtagtggagagcccactagagctgttcagc
gcggaagtggtgatccaggatatcaacgacaacaatcccgctttccctacccgggaaatg
aaattggagattagcgaggccgtggtgccaggcacgcgctttccgctcgagagcgcgcac
gatccggatgtgggaagcaactctttacaaacctacgagctcagccgaaacgagtacttt
gcgcttcgcgtgcagacgcgggaggacagcaccaagtacgcggagctggtgctggagcgc
gccctggaccgggaacgagagccaagtctccagttggtgctgacggcgttggacggagga
accccggctcgctccgccagccttcctattctcatcgccgtgctagacgcgaatgacaat
gcgcctgccttcaaccagtccttgtaccgggctcgcgtcctggaggatgcaccccccggc
acccgcgtggtacaagtccgcgcaacggacctggatgaaggcctcaacggtgaaatcgtt
tactcctttggtagccacaaccgcgccggggtgcgggaactattctccttagaccttgta
accggggtgctgacaatcaagggtcgactggatttcgaagacacgaaactccacgagatt
tacatacaggccaaagacaagggcgccaatcccgaaggagcacattgcaaagttttggta
gaggttttggacgtaaatgacaatgccccggagatcacagtcacctccgtgtacagccca
gtccctgaggatgcccctctaggaactgtcatcgctttgctcagtgtgaccgatctggat
gctggagagaacgggctggtgacttgtgaagttccaccaggtcttcccttcagccttact
tcttctctcaagaattactttactttgaaaaccagcgcagccctggatcgggagactgtg
ccagaatacaacctcagcatcacagcccgagactcgggagccccgtccctctcagccctt
acaacactgcgggtgcaagtgtccgacatcaacgacaaccctccacaatcttcccagtct
tcctacgacgtttacgtggaggaaaataatctccccggggttcccatactaaatctaagt
gtctgggaccccgacgccccgcagaatgctcgcctttccttctttcttttggagcaagga
gctgaaactgggctagtgggtcgctatttcacgataaatcgtgacagtggcgtcgtgtca
tccttagtgcccctggactatgaggatcagcgggagttcgaattaacagctcatatcagc
gacgggggcactccggtcttgaccaccaacatcagtgtaaacatatttgtcactgatcgc
aacgacaacgccccccaggtcctatacccccgacctggcgggagctcggtggagatgctg
cctcgaggtaccgccgctggccacgtggtcacgcgggtggtaggctgggacccagatgca
gggcacaacgcctggctctcctacagcctcttgggagcccccaaccagagcctttttgcc
gtggggcttcacacgggtcaagtcagcactgcccgtccagtccaggacacagattcgccc
aggcagactctcacggtcttaatcatggacaatggggagccgtcgctgtccaccaccgcg
accctgactgtgtcagtaaccgaggaatctcctgaagcccgggccgagttcccctctggc
tctgcccctcgtgagcaaaataaaaatctcaccttttatctactcctctctctaatcctg
gtctcggtggggttcgcagtcacagtattgggagtgatcatattcaaagtttacaagtgg
aaacagtccagggacctataccgagctcccgtgagctccttgtaccgaacaccagggcct
tctctgcacgcagacgccgtgcggggaggcctgatgccgccgcacctctaccatcaggtg
tacctcaccactgactcgcgccgcagcgacccgctgctgaagaagcctggcgccgccagc
cccctggccagccgccagaacacgctgcgcagctgcgatccggtgttctataggcaagtg
ttgggtgcagagagctcccctcccggacaggtaagagttagcaagtcatccataatgata
gtaatgctttttgattcctgcaccatgttgtggaagnngtatgaggtgttttttagtgat
gaagatatttacctaattatgcatccacattttcacctggcccttcctagagcaaacgtt
gtacctttgtga
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