Exiguobacterium sp. AT1b: EAT1b_2242
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Entry
EAT1b_2242 CDS
T00897
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
eat
Exiguobacterium sp. AT1b
Pathway
eat03030
DNA replication
eat03410
Base excision repair
eat03420
Nucleotide excision repair
eat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EAT1b_2242
03410 Base excision repair
EAT1b_2242
03420 Nucleotide excision repair
EAT1b_2242
03430 Mismatch repair
EAT1b_2242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eat03032
]
EAT1b_2242
03400 DNA repair and recombination proteins [BR:
eat03400
]
EAT1b_2242
Enzymes [BR:
eat01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
EAT1b_2242
DNA replication proteins [BR:
eat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EAT1b_2242
DNA repair and recombination proteins [BR:
eat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
EAT1b_2242
NER (nucleotide excision repair)
GGR (global genome repair) factors
EAT1b_2242
MMR (mismatch excision repair)
DNA ligase
EAT1b_2242
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EAT1b_2242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
DNA_ligase_ZBD
BRCT
HHH
Nlig-Ia
PTCB-BRCT
HHH_3
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ACQ71164
UniProt:
C4L2B2
LinkDB
All DBs
Position
2192758..2194752
Genome browser
AA seq
664 aa
AA seq
DB search
MEMAERVEELRQTLNQYGYEYYVLDRPSVPDSEYDRLMNELIQIETDYPELRTPDSPTQR
VGGAPLDAFVKVTHDTPMLSLGNVFSKEELVEWVERIEKDLGYTPTFVAELKFDGLAVSL
KYENGRLVRGATRGDGTTGEDITQNLKTIRSIPLRLNEDVTFEVRGEAYMPKRSFEQLND
ERERIGEPLFANPRNAAAGSLRQLDSKIAASRNLAFFAYGLVSQDDLVASHDESLDYLKR
LGVAVSGDYTTCQTADELWDYIETYVTKRSDLPYEIDGIVIKVAGYEEQEQLGFTAKSPR
WAVAYKFPAEEVVTTIEDVDFSVGRTGKVTPRARFAPVSVAGSTVTYATLHNEDFIKEKD
LHIGDRVVIKKAGDVIPAVVSALASERSGEERVIEFPTHCPACGSELIRLEGEADHRCVN
PECPAQLLEGLIHFVSRQAMNIDGLGEKVITQLHEAGLVHNVADLYRLDRDDLLGLERMG
ETSVTNLLSAIEQSKQNSLERVLFALGIRLVGQKAASLIAERFETMDAIIAATVEELTSI
DGIGTKMAESIVLYFEKPEARELVKELAESGVNLSFKGMKRPTTEGAPLSGKTVVLTGKL
HEMTRGEAGKQLELLGASVTGSVSKNTDLLVAGEKAGSKLAKAESLGIEVWDEAKLLDFL
KEHA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggagatggcagaacgcgtagaagagctacgtcaaacgttaaatcaatatggttacgag
tattacgtactcgaccgtccgagcgtgccggattcggagtatgaccgattgatgaacgaa
ttgattcaaatcgagactgattatcctgaacttcgaacaccggattctccgacgcaacgc
gtcggaggggctccgctcgacgcatttgtcaaagtgacacatgacacgccgatgctctcg
ctcggcaacgtcttctcgaaagaggaactcgtcgagtgggtggagcgaatcgagaaagat
ctcggctacacgccgacattcgtggcagaactcaaatttgatggtctcgctgtctcgtta
aaatatgagaatggccgtctcgtccgtggtgcgacgcgcggggacgggacgacgggtgag
gacatcacgcaaaacttgaagacgattcgttccatccctctccgattaaatgaggacgtg
acgtttgaagtgcgaggtgaggcgtacatgccgaaacgttcgttcgaacaattgaatgac
gaacgagaacgtatcggcgaaccacttttcgcaaatccgagaaacgctgctgccggttca
cttcgacaactcgactcaaaaattgcggcgtcaagaaatttggcgttcttcgcatacggt
ttggtgtcgcaagacgatctcgtcgcgtcacatgacgaatcactcgattatttgaaacga
ctcggtgtcgcagtgagcggagattatacaacatgccagacggcggatgaactgtgggat
tacattgagacatacgtgacaaaacggagtgacctcccatatgaaattgatgggattgtc
atcaaagtggccgggtatgaagaacaggaacaacttggtttcaccgctaaaagtccgcgc
tgggccgtcgcgtacaagttcccggcagaagaagtcgtgacgacgatcgaggacgtcgat
ttcagtgtcggtcgtacggggaaggtcacaccacgggcacgatttgccccggtttctgtg
gcggggtcgaccgtgacgtatgcgacgcttcacaatgaagattttataaaggaaaaagac
cttcatatcggtgaccgagtcgtcatcaaaaaagcaggagacgtcattccggccgtcgta
tcggcactggcgagtgaacggagcggggaagaacgggtgattgaattcccaacgcattgt
ccggcgtgtgggtcggagttgattcgactcgaaggagaggcggatcatcgttgcgtcaat
ccggaatgtccggctcaactgcttgaaggactcattcatttcgtgtcgagacaagcgatg
aacatcgacgggctcggcgagaaagtcatcacacagcttcacgaagcggggctcgttcac
aatgtggccgacctgtatcgcttggaccgagatgatttacttggactcgagcgcatgggc
gagacgtcagtgacgaacttgctctcggcaatcgaacagtcgaagcaaaattcattggaa
cgggtgctcttcgccctcgggattcgactcgtcggacaaaaggccgcttctttaattgca
gaacggttcgagacgatggatgcgatcatcgctgcgacagttgaagagttgacatccatc
gatggcatcgggacgaagatggccgaatcgattgtcctctatttcgaaaaaccagaagca
cgtgaactcgtcaaagaattggcggaatcaggtgtgaacttatcattcaaaggaatgaag
cgtccaacgactgaaggggcaccgctctctgggaagacagtcgtattgacggggaaattg
catgagatgacacgtggcgaggctgggaagcagcttgaactcctcggcgcgagtgtgaca
gggagcgtgagtaaaaacacagacttgctcgtcgccggtgaaaaggcaggttcgaagctg
gcgaaagccgaatctctcggaatcgaagtatgggatgaagccaagctgctcgacttttta
aaggaacatgcataa
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integrated database retrieval system
