Aromatoleum aromaticum: ebA4877
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Entry
ebA4877 CDS
T00222
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
eba
Aromatoleum aromaticum
Pathway
eba03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ebA4877 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eba03400
]
ebA4877 (nth)
Enzymes [BR:
eba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ebA4877 (nth)
DNA repair and recombination proteins [BR:
eba03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ebA4877 (nth)
Prokaryotic type
ebA4877 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Ogg-HhH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
CAI08898
UniProt:
Q5P1B6
LinkDB
All DBs
Position
complement(2900049..2900681)
Genome browser
AA seq
210 aa
AA seq
DB search
MKRDAIREFFRRLAEANPSPTTELEYGSPFQLLVAVVLSAQATDKSVNLATRELFAVAPT
PEAMLSLGEENVTERLRSIGLYRNKAKNVVALSRLLLERHGGDVPRSREALEALPGVGRK
TASVVLNIVFGEAVMAVDTHIFRVANRTGLAPGKDVLAVEQALMRRVPKEYLHNAHHWLI
LHGRYVCTARKPRCKDCLVRDLCEFRDKTV
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgacgcgattcgtgaatttttccgccgcctggcggaggcgaatccgagcccg
acgaccgagctcgagtacgggtcgccattccagctgctcgttgccgtggtgctttccgcg
caggccaccgacaagagcgtgaacctggcgacccgcgagttgttcgccgtcgccccgacc
cccgaagccatgctgagcctcggggaggaaaacgttaccgaacgcctcaggtcgatcggc
ctttaccgcaacaaggcgaaaaacgtcgtcgcgctgtcgcggctactgctcgagcgccac
ggcggcgacgtgcctcgcagccgcgaggccctcgaagcgctgcccggcgtcggccgcaag
accgccagcgtcgtgttgaatatcgtgttcggcgaagcggtgatggcagtcgacacgcat
atttttcgcgtcgccaaccgcaccggcctggctcctggcaaggatgttctcgccgtcgag
caggccttgatgcgtcgcgtgccgaaggaatacctgcacaatgcccatcactggctgatc
ctgcacggccgctacgtctgcacggcgcgcaagccgcgctgcaaagattgcctcgtgcgc
gacctgtgcgagttccgcgacaagaccgtttaa
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