Escherichia coli BL21-Gold(DE3)pLysS AG: ECBD_0078 Help Entry ECBD_0078         CDS       T00939                                  Name (GenBank) DNA ligase (NAD(+))   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ebd  Escherichia coli BL21-Gold(DE3)pLysS AG Pathway ebd03030   DNA replication ebd03410   Base excision repair ebd03420   Nucleotide excision repair ebd03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ebd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     ECBD_0078    03410 Base excision repair     ECBD_0078    03420 Nucleotide excision repair     ECBD_0078    03430 Mismatch repair     ECBD_0078  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ebd03032]     ECBD_0078    03400 DNA repair and recombination proteins [BR:ebd03400]     ECBD_0078 Enzymes [BR:ebd01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      ECBD_0078 DNA replication proteins [BR:ebd03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      ECBD_0078 DNA repair and recombination proteins [BR:ebd03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      ECBD_0078    NER (nucleotide excision repair)     GGR (global genome repair) factors      ECBD_0078    MMR (mismatch excision repair)     DNA ligase      ECBD_0078   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       ECBD_0078 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB RNA_ligase Motif Other DBs NCBI-ProteinID:  ACT27157 LinkDB All DBs Position 84910..86592 Genome browser AA seq 560 aa AA seqDB search MKVWMAILISILCWQSSVWAVCPAWSPARAQEEISRLQQQIKQWDDDYWKEGKSEVEDGV YDQLSARLTQWQRCFGSEPRDVMMPPLNGAVMHPVAHTGVRKMVDKNALSLWMRERSDLW VQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGPLANSTLQGE IFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSLGVFVWAWPDGPQLMSDRLKELA TAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVTDGVVVRAAKEPESRHWLPGQAEWL VAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIA PGDQILVSLAGQGIPRIDDVVWRGAERTKPTPPENRFNSLTCYFASDVCQEQFISRLVWL GAKQVLGLDGIGEAGWRALHQTHRFEHIFSWLLLTPEQLQNTPGIAKSKSAQLWHQFNLA RKQPFTRWVMAMGIPLTRAALNASDERSWSQLLFSTEQFWQQLPGTGSGRARQVIEWKEN AQIKKLGSWLAAQQITGFEP NT seq 1683 nt NT seq  +upstreamnt  +downstreamnt atgaaagtatggatggcgatattaataagtatcttgtgctggcaatcatctgtgtgggcg gtctgtccggcctggtcgccagccagagcacaggaagaaatttcccgcctgcaacagcaa ataaaacagtgggacgatgactactggaaggaaggaaaaagtgaggtggaagacggtgtt tacgatcagttaagcgcccgtcttacgcagtggcaacgctgctttgggagcgagccccgc gacgtgatgatgccgcctttaaatggtgcggttatgcatccggttgcccatacgggtgta cgcaaaatggtggataaaaacgcattaagtctgtggatgcgagaacgtagcgatctttgg gtgcagccaaaagttgatggcgttgcggtaaccctggtttatcgggacgggaaactgaac aaagcaatcagtcgcggtaatggcctgaaaggcgaggactggacgcagaaagttagctta atttccgctgtgccgcaaaccgttagcgggcctttagccaacagtacgcttcagggggaa atatttctccagcgcgaggggcatatccaacaacaaatggggggaataaatgcccgcgca aaagttgctggcttgatgatgcgccaggacgatagcgacacgctgaattctctgggcgtt tttgtctgggcatggccggatggaccgcagttaatgtctgatcgtttaaaagagctggct accgcaggttttactctaacgcagacgtatacccgtgcggtgaaaaatgctgatgaagtt gcgcgcgtacgcaatgagtggtggaaagcggaattacccttcgtcaccgatggcgtagtt gtacgagcggcgaaagagccagaatcccgccattggctaccgggccaggcagagtggctg gtggcctggaaatatcaacctgtagctcaggttgccgaagtgaaggcaattcagtttgcg gtgggtaagagcggtaaaatatcggtggttgcgtcactcgcacctgtcatgctggatgat aaaaaagtccagcgggtgaatattggttccgtcaggcgctggcaggagtgggatattgcg cctggtgatcagattctcgtcagccttgccggtcagggtattcctcgcattgatgatgtg gtgtggcgcggtgcagaacgtacaaaaccgacaccgccagaaaaccgctttaactcgttg acctgctactttgcttctgatgtttgtcaggaacagttcatttcacgcttagtctggctg ggggcaaaacaggttcttgggctggatggcattggtgaggccggctggcgcgcgctgcat cagactcatcgctttgagcatatcttttcctggcttttattaacgccagagcaattacag aacacgccggggatcgcgaaaagtaaaagtgcgcagctatggcatcagtttaatctggct cgtaagcagccttttactcgctgggtgatggcaatgggaataccgctaacccgggcggcg cttaatgccagtgatgaacggtcctggtcgcaacttttatttagcacggagcagttctgg cagcagctgccgggcactggatcggggcgcgccagacaggttattgaatggaaggaaaat gcgcaaatcaagaagctgggcagttggctggctgcccagcagatcacaggttttgaacct tag

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