Enterobacter bugandensis: FAI37_06155
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Entry
FAI37_06155 CDS
T05993
Symbol
ligB
Name
(GenBank) NAD-dependent DNA ligase LigB
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ebg
Enterobacter bugandensis
Pathway
ebg03030
DNA replication
ebg03410
Base excision repair
ebg03420
Nucleotide excision repair
ebg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAI37_06155 (ligB)
03410 Base excision repair
FAI37_06155 (ligB)
03420 Nucleotide excision repair
FAI37_06155 (ligB)
03430 Mismatch repair
FAI37_06155 (ligB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebg03032
]
FAI37_06155 (ligB)
03400 DNA repair and recombination proteins [BR:
ebg03400
]
FAI37_06155 (ligB)
Enzymes [BR:
ebg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
FAI37_06155 (ligB)
DNA replication proteins [BR:
ebg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FAI37_06155 (ligB)
DNA repair and recombination proteins [BR:
ebg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
FAI37_06155 (ligB)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAI37_06155 (ligB)
MMR (mismatch excision repair)
DNA ligase
FAI37_06155 (ligB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FAI37_06155 (ligB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_DNA_ligase
DNA_ligase_aden
DUF3701
Motif
Other DBs
NCBI-ProteinID:
QCE27040
LinkDB
All DBs
Position
complement(1277923..1279593)
Genome browser
AA seq
556 aa
AA seq
DB search
MWRWISGLMLLWCGYGAAVCPVWSQAKAEKEIASLSAQIKRWDEAYWKLGVSEVSDEVYD
QLNGRLTQWQRCFGNDFAESALPALEGNVKHPVAHTGVRKAASKEALGHWMHGRKNLWMQ
PKVDGVAVTLVYRNGKLARAISRGNGLKGEDWTARVRLIPSVPKEVSGALANSVLQGELF
WLRENHVQRQMGGMNARAKVAGAMMRQKDNALLSQTGIFIWAWPDGPKGMENRLSELSSA
GFSLTARYTLPVQAVDAVEKQRLAWQNTALPFATDGIVVRSAESPTGESWLPGEGNWIIA
WKYSPAAQVAEVRNILFSVGRTGKISVVAALEPAQLDDKRVQRVSLGSVGRWQRLDIAPG
DQIQVSLAGQGIPRFDKVVWRGADRQKPEPPASRYHSLSCFYASPECMEQFFARLTWLSS
KQVFNIEGLGESGWRTLWQAHHFEHLFSWLLLTQEQLQSTPGFSAARGLALWHRFNQVHE
QPFIRWIMALGVPLPQASLKALEDVSWQKMSERSEKAWQALPGTGAEKARQIVAWLHAPE
IDVLVRWLAQQHINGF
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggtggataagcgggttaatgctgttgtggtgtggttacggggcggcggtgtgc
ccggtgtggtcacaggcaaaagccgaaaaagagattgcgtcattaagtgcacaaatcaaa
cgctgggatgaggcttactggaagctgggggtgagcgaggtcagtgacgaagtgtatgac
cagctcaacggccgtttaacccagtggcagcgctgtttcggcaacgattttgctgagagc
gccctacctgcgctggagggaaacgtaaaacatcctgttgcccatacgggggtacgtaaa
gcagccagcaaagaagcgctgggtcactggatgcacggccggaaaaatctctggatgcag
ccaaaagtcgatggcgtggcggtgacgctggtgtatcgcaacggaaagctagcgcgggcc
atcagccgtggtaatgggctaaaaggcgaggactggacggcccgcgtgcgtttgatcccg
tccgtgcccaaggaggtatccggcgcgcttgcaaacagcgtcttacagggggagcttttc
tggctacgcgaaaaccacgtccagcggcagatgggcggaatgaatgctcgcgcaaaagtg
gcgggcgcgatgatgcgacaaaaggacaacgcgcttctgagccagacaggaatatttatc
tgggcctggccggatggaccgaagggaatggaaaacaggctttctgagctgtccagcgca
ggcttttccctgacggcgcgctatacgttgcccgtacaagcggttgatgctgttgaaaaa
cagcgtttggcctggcaaaacacggcattgccctttgccacggatggcatagtggttcgg
tctgcggagtcacctacaggggaaagttggctgcccggcgaaggcaactggattatcgcg
tggaaatattcgcctgcggcacaggtcgcagaggtcaggaatattcttttttccgtgggg
cgcacgggcaaaatttctgtcgtggcggcacttgagcctgcgcagttggacgataaacgg
gtgcagcgagtgagtctcggttcggttgggcgttggcagaggctggatattgccccgggc
gatcagatccaggtcagcctggcagggcagggtatcccccggtttgataaggtggtctgg
cgaggggcggacagacaaaaaccagagcctccggcctcgcgttatcactccctgagttgc
ttttatgcctcgccggagtgtatggaacagttctttgcccggctgacgtggctcagttca
aagcaggtattcaacattgaaggattaggtgagtcaggctggcggacactctggcaggcg
catcattttgaacatctcttttcgtggctgctattaacgcaggagcagctgcagtcgacg
ccgggattctctgccgcacgcgggctggcgctctggcatcgctttaatcaggtgcatgag
cagccttttatccgctggattatggcgctgggtgttccgctgccacaggcctcgctgaag
gcgttggaagatgtgtcgtggcagaagatgagcgaacgcagtgaaaaggcctggcaggcc
ttgccgggtacgggagcggagaaggcgcggcaaatcgttgcctggctgcacgcgccagag
atcgatgtgctggtcaggtggcttgctcagcagcacatcaatgggttctga
DBGET
integrated database retrieval system
