Enterobacter bugandensis: FAI37_13035
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Entry
FAI37_13035 CDS
T05993
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ebg
Enterobacter bugandensis
Pathway
ebg03030
DNA replication
ebg03410
Base excision repair
ebg03420
Nucleotide excision repair
ebg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAI37_13035 (ligA)
03410 Base excision repair
FAI37_13035 (ligA)
03420 Nucleotide excision repair
FAI37_13035 (ligA)
03430 Mismatch repair
FAI37_13035 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebg03032
]
FAI37_13035 (ligA)
03400 DNA repair and recombination proteins [BR:
ebg03400
]
FAI37_13035 (ligA)
Enzymes [BR:
ebg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
FAI37_13035 (ligA)
DNA replication proteins [BR:
ebg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FAI37_13035 (ligA)
DNA repair and recombination proteins [BR:
ebg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
FAI37_13035 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAI37_13035 (ligA)
MMR (mismatch excision repair)
DNA ligase
FAI37_13035 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FAI37_13035 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
Prok-E2_C
DZR_2
Zn_ribbon_NUD
Motif
Other DBs
NCBI-ProteinID:
QCE28297
LinkDB
All DBs
Position
2698038..2700053
Genome browser
AA seq
671 aa
AA seq
DB search
MDSIEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELEAQHPELITPDSPTQ
RVGAEPLGAFSQVRHEVPMLSLDNVFDEESFLAFNKRVQDRLKSSDSLTWCCELKLDGLA
VSLLYENGVLVRAATRGDGTTGEDITTNVRTIRAIPLKLQGDNIPARLEVRGEVFLPQAG
FEKINEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHL
GRLLQFKAWGLPVSNRVQLCDSPEAVLAFYHKVEEDRPTLGFDIDGVVIKVNSLALQEQL
GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVQVAGVLVSNATLHN
ADEIERLGLRIGDKVVIRRAGDVIPQVVNVVESERPDDTREVVFPTHCPVCGSDVERVEG
EAVARCTGGLICGAQRKESLKHFVSRRAMDVDGMGDKIIDQLVEKEYVHTPADLFRLTAG
KLTGLDRMGPKSALNVVNALEAAKETTFARFLYALGIREVGEATAAGLATYFGTLEALEK
ASIDELQKVPDVGIVVATHVFNFFAEESNREVIGKLLEEGIKWPAPVVVNAEDIDSPFAG
KTVVLTGSLSQLSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI
DEAEMMRLLGE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggactcaatcgaacaacaactcactgaactgcgaaccacgcttcgccatcatgaatat
ctctatcatgttatggacgcaccggaagtgcctgatgctgagtatgaccggctgatgcgc
gagctgcgcgagctggaggcgcagcacccggaactgattacgccagattctccgacccag
cgcgtcggcgccgagccgctgggggctttcagccaggtgcgtcacgaagtgccgatgctg
tcgctggacaacgtctttgatgaagagagcttcctcgcgtttaacaagcgcgtgcaggac
cgtctgaaaagcagcgattccctcacctggtgctgcgagttgaagctcgacggcctggcg
gtcagccttctctatgaaaacggcgtgctggtgcgcgccgccacgcgtggcgacggtacg
acgggtgaagacatcaccaccaacgtgcgaaccatccgcgcgatcccgctgaagctgcag
ggagacaacattcccgcgcgtctggaagtgcgcggcgaggtgttcctgccgcaggcggga
ttcgagaaaattaacgaagaggcgcgtcgcaccggcgggaaagtgtttgctaacccgcgt
aacgcggcggcgggctctctgcgccagcttgacccgcgcatcaccgcgaagcgaccgctt
actttcttctgctacggcgtcggtattctggaaggtggtgagttaccggatacgcacctc
gggcgtctgctgcagtttaaagcctggggcctgccggtgagcaaccgcgttcagctctgc
gactcgccggaagcggtgctggcgttctaccacaaagtggaagaggaccgtccgacgctc
ggctttgatatcgatggcgttgtcatcaaggtcaattcgctggcgctgcaggagcagctg
ggctttgtggcgcgtgcgccgcgctgggcggtggcgtttaaattccctgctcaggagcag
atgaccttcgttcgcgacgtggagtttcaggtgggacgtacgggcgctattaccccggtc
gctcgactggagccggtgcaggtcgcaggcgtgctggtgagtaacgctacgctgcacaac
gccgatgaaatcgaacgcctcggcctgcgcatcggtgacaaagtggtgattcgccgcgcg
ggcgatgttatcccgcaggtggtgaacgttgttgagtcagaacgtcctgatgatacgcgc
gaggtcgttttcccgacccactgcccggtatgcggctctgacgtagagcgtgtggaaggc
gaagcggtggcccgctgtacgggcggcctgatctgcggcgcgcagcgtaaagagtcgctt
aagcactttgtttcccgtcgcgcaatggacgttgacggcatgggcgacaagattatcgat
cagctggttgagaaagagtatgtccatacgccagcggatctgttcaggctcacggcgggc
aaactgaccggtctggatcgcatggggccgaagtcagccctgaacgtggttaacgcgctg
gaagcagcgaaagagacgaccttcgcccgcttcctgtacgcgctgggcattcgtgaagtc
ggcgaagcgacggcggcaggtttagccacgtactttggtacgctggaggcgctggaaaag
gcaagcatcgacgagctgcagaaagtgccggacgtcggcatcgtcgtcgccacgcacgtc
tttaacttctttgccgaagagagcaaccgcgaggtcatcggcaagctgctggaagagggc
attaaatggcctgcgccggtggtagtcaacgccgaagacattgatagcccatttgccggt
aaaaccgtggtgctaaccggtagccttagccagctttcacgtgacgatgcaaaagcgcgt
ctggtggcgctgggggccaaagtggcgggcagcgtgtcgaagaaaaccgacctggtgatt
gccggcgaagctgcgggttcgaagctggcgaaagcccaggagctcggcattgaggttatc
gacgaagcggaaatgatgcgcctgttaggagagtaa
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integrated database retrieval system
