Endosymbiont of Bathymodiolus septemdierum: BSEPE_0187
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Entry
BSEPE_0187 CDS
T04606
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ebh
Endosymbiont of Bathymodiolus septemdierum
Pathway
ebh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ebh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSEPE_0187 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebh03400
]
BSEPE_0187 (nth)
Enzymes [BR:
ebh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BSEPE_0187 (nth)
DNA repair and recombination proteins [BR:
ebh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSEPE_0187 (nth)
Prokaryotic type
BSEPE_0187 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
HHH_8
RecR_HhH
Translat_reg
HHH_5
ASPRs
Motif
Other DBs
NCBI-ProteinID:
BAS67209
UniProt:
A0A0P0UQC3
LinkDB
All DBs
Position
complement(193845..194510)
Genome browser
AA seq
221 aa
AA seq
DB search
MLNQSDTKKTMNAETRSEIFGRLLKKIPNPTTELNYSTPFELLVAVTLSAQATDKSVNKV
TEKLFPLANTPEAIYELGEDAVRETIKTIGLFNSKAKHIVQACKILIDKYDSKVPETRKE
LEALPGVGRKTANVVLNTAFGHPTIAVDTHIYRVANRTAIASGKTVLEVEKKLVKFIPDE
YRVPAHHLMILHGRYTCKARSPLCPECILLDLCEYEEKNLD
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
ttgctcaatcaaagtgatacaaaaaaaacaatgaacgccgaaactcgcagtgaaatattt
ggtaggttactaaaaaagatacctaatccaacaacagaattaaactattcaacgcctttt
gaattgttggtcgcggtaactttatcagcacaagcgacggataaaagtgtcaacaaggtc
acggagaaacttttcccattggcaaatacacctgaagcaatttatgaattgggtgaagat
gcagtgagagaaaccatcaaaaccatcggtctgtttaactcaaaagccaagcatatcgtt
caagcatgcaaaattttgattgataaatacgattctaaagtacccgaaacacgcaaagaa
ctagaagccctgccaggcgttggtcgcaaaacagcaaatgtggttttaaacacagctttt
ggacatccgaccattgctgttgacacacacatttatcgtgttgccaatcgcacagcgatt
gccagtggtaagactgtgttagaagtagaaaagaaattggttaaattcatccctgatgaa
tatcgtgtgcccgcacatcacttaatgattttacacggtcgttatacttgtaaagcgcgt
tcgccgttgtgccctgagtgtattttgcttgacttatgtgagtacgaagaaaagaattta
gactaa
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