Erythrobacteraceae bacterium WH01K: PF049_00030
Help
Entry
PF049_00030 CDS
T10954
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ebk Erythrobacteraceae bacterium WH01K
Pathway
ebk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ebk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PF049_00030 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebk03400
]
PF049_00030 (nth)
Enzymes [BR:
ebk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PF049_00030 (nth)
DNA repair and recombination proteins [BR:
ebk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PF049_00030 (nth)
Prokaryotic type
PF049_00030 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WBY16597
LinkDB
All DBs
Position
4521..5192
Genome browser
AA seq
223 aa
AA seq
DB search
MTKDQIFEFFRRLAEDNPSPETELEYGNCYQLVVAVALSAQATDVGVNKATRALFAAVET
PQQMLDLGEAGLKEHIKTIGLFNSKATNVIAMSRMLVGEYGGEVPDTRDDLVRLPGVGRK
TANVVLNCWFKQETFAVDTHILRVGNRTGLAKGKTPEQVETKLDKRVPQPFRLHAHHWLI
LHGRYVCKARTPECWRCPVIDLCSFRKKVMEPPARAKGSKKAG
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaggatcagatcttcgaattcttccggcggctggcggaggacaatccctcgccc
gagaccgagctggaatacggcaattgctaccagctggtcgtcgctgtcgccctgtcggcg
caggcaaccgatgtcggcgtgaacaaggcgacgcgcgccctgttcgccgctgtcgaaacg
ccgcagcagatgctggatctgggcgaggctggcctcaaggagcacatcaagaccatcggc
ctgttcaattccaaggcgaccaatgtcatcgcgatgagccggatgctggtcggcgaatat
ggcggcgaggttccggacacacgcgacgatctcgtccgcctgcccggtgtggggcgcaag
acggcgaatgtcgtcctcaattgctggttcaaacaggaaacctttgccgtcgacacccac
atactgcgcgtcggcaaccgcacgggcctcgccaaggggaagacgccggaacaggtcgag
acgaagctggacaagcgggttcctcagccctttcgcctgcacgcgcatcactggctgatc
ctgcatggccgctatgtctgcaaggcgcgcacgcccgaatgctggcgctgcccggtcatc
gacctgtgcagcttccgcaagaaggtcatggaaccgccggcccgggcgaagggttcgaag
aaggcaggctga
DBGET
integrated database retrieval system
