Entomobacter blattae: JGUZn3_01750
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Entry
JGUZn3_01750 CDS
T07040
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ebla
Entomobacter blattae
Pathway
ebla03030
DNA replication
ebla03410
Base excision repair
ebla03420
Nucleotide excision repair
ebla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JGUZn3_01750 (ligA)
03410 Base excision repair
JGUZn3_01750 (ligA)
03420 Nucleotide excision repair
JGUZn3_01750 (ligA)
03430 Mismatch repair
JGUZn3_01750 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebla03032
]
JGUZn3_01750 (ligA)
03400 DNA repair and recombination proteins [BR:
ebla03400
]
JGUZn3_01750 (ligA)
Enzymes [BR:
ebla01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
JGUZn3_01750 (ligA)
DNA replication proteins [BR:
ebla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JGUZn3_01750 (ligA)
DNA repair and recombination proteins [BR:
ebla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
JGUZn3_01750 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JGUZn3_01750 (ligA)
MMR (mismatch excision repair)
DNA ligase
JGUZn3_01750 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JGUZn3_01750 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
PTCB-BRCT
Nlig-Ia
Motif
Other DBs
NCBI-ProteinID:
QNT77440
UniProt:
A0A7H1NNT0
LinkDB
All DBs
Position
196552..198669
Genome browser
AA seq
705 aa
AA seq
DB search
MTNSPRPALSDLTEEQASQELAELAQRISELNKAYYQDDTPLADDKDYDAIFKRNLDIEK
AFPHLIRPDSPSQKVGAPLPTTSSLARKPHLIPMLSLENCFHRHEFELFIDRITKFLGSK
ETLTTTLAFIAEPKIDGLSINLTYKNGKLTYGTTRGNGQEGEDVTNNLLTIPSIPQELKG
QAPELIEIRGEIFIGKQAFLALNQEQAEHGHKLFANPRNAAAGSLRQLDATITAKRPLNM
FAYALGFNSGEMTWETHEAYLKQLKKWGFHVNPLLRKIHNAQDAELFQQEIERERSHLDY
DIDGVVYKVNAIDLQNRLGFVGRNPRWAIAWKFAAEQAITHLLEIDIQVGRTGALTPVGK
LEPVNVGGVLISRVSLHNEDEIQRKDLRVGDTVKIQRAGDVIPQIVENMSLGASQRSTPF
VFPLICPVCYSRAERLAGEAVRRCTGGLTCQAQIVERLIHMCSRNAFDIEGMGEKTVKEL
YERGWLNTPADIYQLKHHETDLAQCEGWGSLSARNLIENIEARRVIPLSRFIYGLGIRRI
GEKNAQLLARHYTSYAHWSQEMLEACITGSEARLTLGSISGIGPSIAEELVAFFLEPHNR
KTLSDLAACMKEIIDDTLPESSALAGKTVVFTGTLTTLTRQEAKALAEKLGAKVTGTISK
KTDIVVIGTEAGSKARKAQTLNDSGEAHILLLNEQEWLETIGHQG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgactaactctccacgccccgccctctccgatcttacggaagagcaagccagtcaagaa
ctggcagaacttgctcaaagaatttctgagcttaacaaggcctattatcaagatgatacc
ccccttgccgatgacaaggattacgatgccatctttaaaagaaatctggatattgagaag
gctttccctcatctcatccgccccgatagccccagccaaaaagtgggagccccccttcct
actacctcatcgctggcacgcaaacctcacctcatccccatgctttcattggaaaattgc
ttccaccggcatgaatttgagctgtttatagaccgtataacgaaatttctgggatcaaaa
gaaaccctcacgaccacgctagcctttatcgctgagcccaaaattgatggcctctccatt
aatctcacctacaaaaacggcaagcttacctatggtacaacccgcggtaatggccaggaa
ggggaggatgttaccaacaatttgctcaccattccctctattcctcaggaacttaaaggg
caagcgccagagcttatagaaattcgtggagaaattttcatcggcaaacaggccttttta
gccctcaaccaagaacaagctgagcatgggcacaaactctttgccaacccccgcaatgcg
gccgcaggctcacttaggcagctagatgccactattactgccaaacgccctttaaatatg
tttgcctatgcgcttggctttaactccggggaaatgacctgggagacccatgaagcctat
cttaaacaactcaagaaatggggctttcatgttaacccccttctgagaaaaattcacaac
gcccaggatgctgaactattccagcaagagatagaacgtgaacgctctcaccttgattac
gatattgacggagttgtctataaagtaaatgccatcgaccttcaaaatcgcctgggcttt
gttgggcggaaccctcgctgggctattgcgtggaaattcgcagcagaacaggccataacc
catcttttagaaattgatattcaagtgggaagaacaggtgcccttacgcctgtgggaaaa
ttggaacctgtcaatgtggggggagtcttgatctcaagagtatctttgcataatgaagat
gaaattcagcgcaaagatcttcgtgttggggatactgttaaaatacagcgtgcaggcgat
gttattccccaaattgtggaaaatatgtctcttggagccagtcaacgctccactcctttt
gtcttcccccttatatgtcctgtttgctactctcgtgcagaacgcttggctggtgaagcg
gttaggcgatgtaccggtggccttacctgtcaggcccagattgttgagcggcttatccat
atgtgctctcgcaatgcttttgacattgaaggcatgggagaaaaaaccgtaaaagagctt
tatgaaaggggctggctgaacacccctgctgatatttaccagcttaaacaccatgaaaca
gaccttgcccaatgcgaaggttggggtagcctttcagcccgcaaccttattgaaaatata
gaagcccgcagggttatccccctttctcgctttatttatggtcttggcattcgccgtatt
ggcgaaaaaaatgcccaactcctcgcacgtcactacaccagctatgcgcattggtctcaa
gaaatgctagaagcttgtatcaccggttcagaggccaggctgacactcggctctatttct
ggtattgggccttctattgccgaggagctggttgctttttttctggaaccccataacaga
aaaaccctgagtgaccttgccgcctgtatgaaagagattatcgacgataccttaccagaa
tcgtctgccttagcgggtaaaaccgtggtatttactggtacccttacaaccctgacccgc
caggaggccaaagccttagctgaaaagctaggtgctaaagtcactggcaccatctctaaa
aaaaccgatattgtcgttattggaaccgaggctggttccaaagccagaaaagcccaaact
cttaacgattcgggagaagcgcatatcttgcttcttaatgaacaagaatggttggagacc
atcggccatcaaggctaa
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