Intestinibaculum porci: SG0102_09730
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Entry
SG0102_09730 CDS
T05736
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ebm
Intestinibaculum porci
Pathway
ebm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ebm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SG0102_09730 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebm03400
]
SG0102_09730 (nth)
Enzymes [BR:
ebm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SG0102_09730 (nth)
DNA repair and recombination proteins [BR:
ebm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SG0102_09730 (nth)
Prokaryotic type
SG0102_09730 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
DUF2400
HHH_5
HHH_8
EndIII_4Fe-2S
DUF4460
DUF4294
DUF937
Fucose_iso_C
Motif
Other DBs
NCBI-ProteinID:
BBH26039
UniProt:
A0A3G9JSE0
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All DBs
Position
1031200..1031835
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AA seq
211 aa
AA seq
DB search
MIAKKQDRIIAELNTLFPDAHCVLVHSNPLEMLVAVMLSAQTTDAAVNKVTPALFAAYPT
AQDYADASLEDLEGYLKRLGLYRSKARSLKKMGQALVEHFDGEVPHTMKQLTTLPGVGRK
TANVVLGECFGVPSVPVDTHVERISKRLGFAKRDDTVLDVERKLKRTLPRDSWMKLHHQF
IFFGRYVCKAQNPKCKECHLVDLCKEPHKNL
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgaaaaaacaggaccgtattattgctgaattaaatactttattccctgatgca
cactgcgtcttagtgcattctaatcctttagagatgttagtagccgtgatgttatcagcg
cagaccactgatgcggcggtcaataaggtgactcccgctttgtttgcggcgtatccgacg
gcgcaggattatgccgatgcatcgctggaagatttggaaggctatcttaaacgtttaggt
ctttatcgttccaaagcccgttcattaaagaaaatggggcaggctttagtcgaacatttt
gatggcgaagtcccccatacgatgaaacagctcacaaccttgccgggagtagggcgtaaa
accgcaaatgtcgtgttaggcgaatgtttcggcgtgccaagtgtacccgttgatacccat
gtcgaacgtatttctaagcgccttggctttgcgaaaagagatgacacagttttagatgtt
gaacggaaactcaaacgtactttaccaagagattcctggatgaaactgcatcatcagttt
attttctttggccgctatgtctgcaaagcgcaaaaccctaaatgcaaagaatgccacttg
gttgatctttgtaaagagcctcataaaaatctgtaa
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