Escherichia coli B REL606: ECB_01603
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Entry
ECB_01603 CDS
T00944
Symbol
nth
Name
(GenBank) DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III)
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ebr
Escherichia coli B REL606
Pathway
ebr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ebr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECB_01603 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebr03400
]
ECB_01603 (nth)
Enzymes [BR:
ebr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ECB_01603 (nth)
DNA repair and recombination proteins [BR:
ebr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECB_01603 (nth)
Prokaryotic type
ECB_01603 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
P_gingi_FimA
Motif
Other DBs
NCBI-ProteinID:
ACT39267
LinkDB
All DBs
Position
1688717..1689352
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AA seq
211 aa
AA seq
DB search
MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATDVSVNKATAKLYPVANT
PAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKEKVDI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaaaacgcctggagatcctcactcgcctgcgtgagaacaatcctcatccc
accaccgagcttaatttcagttcgccttttgaattgctgattgccgtactgctttccgct
caggcgaccgatgtcagtgttaataaggcgacggcgaaactctacccggtggcgaatacg
cctgcagcgatgcttgaactgggcgttgaaggggtgaaaacctatatcaaaacgattggg
ctttataacagcaaagcagaaaatatcatcaaaacctgccgtatcttgctggagcagcat
aatggcgaggttccggaagatcgtgctgcgcttgaagccctgcccggcgtaggtcgtaaa
acagccaacgtcgtattaaacactgcattcggctggccgactattgctgtcgacacgcac
attttccgcgtttgtaatcgtactcaatttgcgccggggaaaaacgtcgaacaggtagaa
gaaaagctactgaaagtggttccggcagagtttaaagtcgactgccaccattggttgatc
ctgcacgggcgttatacctgcattgcccgcaagccccgctgtggctcttgtattattgaa
gatctttgtgaatacaaagagaaagttgacatctga
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