Shimwellia blattae: EBL_c25510
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Entry
EBL_c25510 CDS
T02111
Symbol
rumB
Name
(GenBank) 23S rRNA uracil-5-methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
ebt
Shimwellia blattae
Brite
KEGG Orthology (KO) [BR:
ebt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ebt03009
]
EBL_c25510 (rumB)
Enzymes [BR:
ebt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
EBL_c25510 (rumB)
Ribosome biogenesis [BR:
ebt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
EBL_c25510 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Cons_hypoth95
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AFJ47637
UniProt:
I2BAT3
LinkDB
All DBs
Position
complement(2629218..2630363)
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AA seq
381 aa
AA seq
DB search
MQCALYDAGRCRSCQWLEQPVTQQLAAKMADLRALLAESPVAHWLEPLSGPEQGFRNKAK
MVVSGSVERPLLGMLRRDGTAEDLTACPLYPASFQPVFAALKPFIARAGLTPYNVARKRG
ELKYLLLTESQLDGRMMLRFVLRSEAKLAQLRAALPDLQAQLPQLAVISANIQPVHMAIM
EGEQEIPLTPDTALAESFNGVPLWIRPQSFFQTNPTVAARLYATAREWVRGLAVHHMWDL
FCGVGGFGLHCATPDMQLTGIEIAPEAIACARQSAQALGLTRVQFQALDSTRYATGQSET
PDLVLVNPPRRGIGALLCDYLSHMAPAWIIYSSCNARTMAQDLRHLPGYRVERVQLFDMF
PHTAHYEVLALLVRDGQKKAR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtgctctttatgatgccggtcgctgccgctcctgtcagtggctggaacaaccg
gtgactcagcaactggcggcgaaaatggcggatctgcgcgccctgctggccgaaagcccg
gtagcccactggctggagccgctcagcggcccggagcaggggtttcgcaataaggcgaaa
atggtggtcagcggcagcgtggagcgcccgctccttggtatgttacgccgggacggcacg
gcggaagatctcaccgcctgcccgctctacccggcgagcttccagccggtttttgctgcc
cttaagccctttattgcccgggccgggctaaccccctacaacgtggcccgcaaacggggc
gagctgaaatatctgctgctgaccgaaagtcagctggacgggcgcatgatgctgcgcttt
gtcctgcgctctgaggcgaaactcgcccagttacgcgccgcgctgcccgaccttcaggct
cagttgccgcagctggcggtgatttctgccaatattcagccggtgcatatggccattatg
gaaggggagcaggagatcccgctaacgccggacacggcgctggcagagtcgtttaacggg
gttccgctgtggatccgcccgcagagctttttccagacgaaccccacggtcgcggcacgg
ctgtatgccacggcccgggagtgggtgcgcggccttgcggtgcaccatatgtgggatctg
ttttgcggggtggggggatttggcctgcactgcgcaacgccggacatgcagctgaccggt
atcgaaatagcgccagaggcgatagcctgcgcccgtcagtcggcacaggcgctggggctt
acccgggtgcagtttcaggcgctggattctacccgttacgccacggggcagtcagagacg
cccgatctggtgctggtgaacccgccgcgccgggggattggggcactcctgtgtgactat
ctgagccatatggccccggcgtggattatctactccagctgtaatgcgcgcacgatggcg
caggatttgcgccacctgcccggttaccgggttgagcgggtgcagctgttcgatatgttc
ccccatacggcccactacgaagtgctggccctgctggtgcgcgacgggcaaaaaaaagcc
cggtaa
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