Enterobacteriaceae bacterium S05: CUC76_22495
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Entry
CUC76_22495 CDS
T05725
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ebu
Enterobacteriaceae bacterium S05
Pathway
ebu03030
DNA replication
ebu03410
Base excision repair
ebu03420
Nucleotide excision repair
ebu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ebu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CUC76_22495 (ligA)
03410 Base excision repair
CUC76_22495 (ligA)
03420 Nucleotide excision repair
CUC76_22495 (ligA)
03430 Mismatch repair
CUC76_22495 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ebu03032
]
CUC76_22495 (ligA)
03400 DNA repair and recombination proteins [BR:
ebu03400
]
CUC76_22495 (ligA)
Enzymes [BR:
ebu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CUC76_22495 (ligA)
DNA replication proteins [BR:
ebu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CUC76_22495 (ligA)
DNA repair and recombination proteins [BR:
ebu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CUC76_22495 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CUC76_22495 (ligA)
MMR (mismatch excision repair)
DNA ligase
CUC76_22495 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CUC76_22495 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
Prok-E2_C
DUF2229
Motif
Other DBs
NCBI-ProteinID:
AWB64155
LinkDB
All DBs
Position
4504661..4506676
Genome browser
AA seq
671 aa
AA seq
DB search
MEPIEQQLTELRTTLRHHEYLYHVMDAPEVPDAEYDRLMRELRELESQHPELITPDSPTQ
RVGAAPLTAFSQIRHEVPMLSLDNVFDEESFLAFNKRVLDRLKSTDPLIYCCELKLDGLA
VSILYENGVLVQAATRGDGTTGEDITSNVRTIRTIPLRLHGDNIPVRLEVRGEVFLPQAG
FEKINEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPASHS
ARLQQFKAWGLPVSDRVTLCHTPEEVLTYYRKVEEDRPHLGFDIDGVVIKVDSLALQEQL
GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHN
ADEIERLGLKIGDKVVIRRAGDVIPQVVNVVLSERPADARDVEFPTHCPVCQSDVERVEG
EAVARCTGGLICGAQRKESLKHFVSRRALDVDGMGDKIIDQLVEKEYVHTPADLFRLTAG
KLTGLDRMGPKSAQNVVNALEKAKETTFARFLYALGIREVGEATAAGLAAHFGTLEALEQ
ASIEELQKVPDVGIVVATHTFNFFAEESNRDVIAQLLAEGVHWPAPVVVKAEEIDSPFAG
KTVVLTGSLSQLSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVI
DEAEMMRLLGE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgatcgaacaacaactgactgaactgcgaaccacgcttcgccatcatgaatac
ctgtaccacgttatggacgcgccggaagtgcccgatgcggagtatgaccggctgatgcgc
gagctgcgcgagctggagagccagcatccggagctgattaccccggattcgccgactcag
cgcgtgggggcggcgccactgaccgccttcagccagatccgccatgaagtgccgatgctg
tcactggacaacgtgtttgacgaagagagctttctggccttcaacaagcgggtgctggat
cgcctgaaaagcactgacccgctcatctactgctgcgagctgaagctcgacggtctcgcg
gtgagcattctctacgaaaacggcgtgctggtgcaggcggcgacccgcggcgacggcacc
accggcgaggatattacctctaacgtgcgaaccatccgcaccatcccgctcaggctgcat
ggcgataatatccccgtacgcctggaggtgcgcggggaagtgttcctcccacaggccggg
ttcgaaaaaatcaatgaagaagctcgccgcaccggcggaaaagtgtttgctaatccgcgc
aatgcggcggcgggctcgttgcgccagctggacccgcgcatcaccgcgaagcgaccgctt
actttcttctgctacggcgttggggtgctggagggcggtgagctgccggccagccactcg
gcccgtttacagcagttcaaagcatggggattaccggtgagcgatcgcgttaccctttgc
catacccccgaggaagtgctcacttactatcgtaaagttgaagaagatcgtccccatctg
ggctttgacattgatggcgtggtgatcaaagtcgattcgctggcgctgcaggaacagctg
ggtttcgtcgcccgcgcgccgcgctgggccgtggcctttaagttcccggcccaggagcag
atgactttcgtccgggacgtggagttccaggtgggtcgcaccggggcgattacgccggtg
gcgcgcctggagccggtccatgtcgccggcgtgctggtgagtaatgccactttgcataac
gccgatgagattgaacgcttaggcttgaaaatcggcgacaaggtggtgattcgccgggca
ggcgacgtgatccctcaggtggtcaacgtggtgctttccgaacgtccggcagatgcccgg
gatgttgaattcccgacccactgcccggtctgtcagtcagacgttgagcgagtggaaggc
gaggcggtagcccgctgtaccggcggccttatctgcggcgcgcagcgcaaagagtcgctc
aaacactttgtctcccgtcgcgcgctggacgttgacggcatgggcgataagatcatcgac
cagctggtggagaaagagtacgtccataccccggcggatctgttccggctgaccgcaggg
aaactgaccgggctggataggatggggccgaagtccgcgcaaaacgtggtcaacgctctc
gagaaagccaaagagacaaccttcgcgcgtttcctctacgccttgggcattcgcgaggta
ggagaagccacggcggcaggcctggctgcgcattttggcaccctcgaagccctggagcag
gcttccattgaggagctgcagaaggtccctgatgtcggcatcgtcgtcgccacccatact
ttcaacttctttgccgaagagagcaaccgcgatgtcatcgcgcagctgctggcggaaggg
gttcactggccggcgccggtggtggtgaaggcggaagagattgacagcccgtttgcaggc
aaaaccgtcgtcctgaccggcagcctcagtcagttgtcgcgggatgatgccaaagcgcgt
ctggtggcgctgggggcgaaggtggcgggcagcgtgtcgaagaaaaccgatctggtgatt
gcaggcgaagcggcgggttctaagctggcgaaagcgcaggagctcggcatcgaggtgatt
gacgaagccgaaatgatgcgcctgttgggagaataa
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integrated database retrieval system
