Empedobacter brevis: F0358_00020
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Entry
F0358_00020 CDS
T06196
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00020
Citrate cycle (TCA cycle)
ebv00785
Lipoic acid metabolism
ebv01100
Metabolic pathways
ebv01110
Biosynthesis of secondary metabolites
ebv01120
Microbial metabolism in diverse environments
ebv01200
Carbon metabolism
ebv01210
2-Oxocarboxylic acid metabolism
Module
ebv_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ebv_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
F0358_00020
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
F0358_00020
Enzymes [BR:
ebv01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
F0358_00020
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Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
QES91213
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Position
complement(5286..8075)
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AA seq
929 aa
AA seq
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MDRFSFLNAAHLEFIGDLYDQYVQYPDSIEPSWKAFFQGYDFANATYDGEPLFAPAPKAA
SSKGSQPTQAVVNSAVVSQVPDNVQKEFKVINLIDAYRTRGHLFTKTNPVRARRTFEPSL
DIKNFGLTDADLDLTFNAGEILGIGGPITLREIIGHLENMYCESIGIEYMYVREPQRINW
IQNWLNQNLNQPKLSKEEKERVLEKLNEATAFENFMHTKYVGQKRFSVEGNESLIPALDT
LINRSADHGVQEVIVGMAHRGRLNVLANIFGKSYSQIFSEFEGKAFDTDLMAGDVKYHMG
SSNHIKALNGKEILINLAPNPSHLETVDAVVEGITRAKAEEDYKDDYSKIIPILIHGDAA
VAGQGIVYEVVQMAGLDGYKTGGTVHVVVNNQIGFTTNYLDARTSTYCTDVAKVTLSPVM
HVNSDDVEAVVHAFRFAADYRAQFGSDVFIDLLGYRKYGHNEGDEPKFTQPKLYNIISKH
PNPREIYKDKLLKEGVIGEEIVKQKEAEFKALLETNFEASKEIERNHIFPFMPEEWEGFE
IADDAKVFEQANTAYDEAKLREIAKAVSTVPEGKKLIKKVSRLIEGRGKMIDEDKIDWGL
GEALAFGSILTDGRNVRVSGEDVERGTFSHRHAVVKTEDTEEEIILLNHINNEQGQLRIY
NSLLSEYAVLGFDYGYAMANPKALTIWEAQFGDFVNGAQIVIDQYISAAEDKWKLQNGLV
MLLPHGYEGQGAEHSSARLERFLQMCAGNNMFVANITTPANFFHALRRQVVTDYRKPLVV
MSPKSLLRHPSAVSPLADFANGGFQEIIEDVTVDAKKVKKVVFCSGKIYYDLDKKRHELG
DTETAIIRLEQLYPLNEEKVDAIISKFGNAKLVWAQEEPENMGAWMYILRKLRKYPFDVV
SPAESAATAPGSSKRWAAIYEEVINKVFN
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtttttcgtttttaaatgccgctcatttagagtttataggcgacttatatgat
caatacgtccaatatccggatagtattgaaccaagttggaaagcttttttccaaggttat
gattttgcgaatgcaacatatgatggagaaccattatttgcaccagcaccaaaagcagct
tcaagcaaaggtagtcaaccaacacaagcagtagttaattcagctgttgtttctcaagtt
ccagacaatgttcaaaaagagtttaaagtcatcaatttgattgatgcttaccgtactcgt
ggacatttgtttacgaagactaaccctgttagagctcgtagaacttttgaaccttcatta
gacatcaaaaactttggtttgacagatgctgatttagatttaacattcaacgctggagaa
attttaggtattggtggaccaatcactttacgtgaaatcattggacacttagagaacatg
tactgcgaatctatcggaatcgagtatatgtatgtaagagaacctcaaagaattaattgg
attcagaattggttaaaccaaaatttgaatcaaccaaaattatcaaaagaggaaaaagaa
cgtgtattagaaaagttgaatgaagctactgcttttgaaaactttatgcatacaaaatat
gtcggtcaaaaacgtttctcagtagaaggaaatgaatctttgatacctgctttggataca
ttgattaaccgttctgctgatcacggagtacaggaagttattgtagggatggctcaccgt
ggacgtttgaatgttctggctaacatttttgggaaatcatattctcaaatcttttcagaa
ttcgaaggaaaagcttttgatacagatttaatggccggtgatgttaaatatcacatggga
tcgtcaaatcatatcaaagcattgaatggaaaagagatcttaatcaatttagccccaaac
ccttctcatttagaaactgtagatgcagttgtggaaggaattacacgagctaaagcagag
gaagattacaaagatgattattctaaaatcattccaattttaattcatggtgatgctgct
gtggctggacaaggaatcgtatatgaagttgttcaaatggcaggattagacggatacaaa
acaggtggtacagtacatgttgtggtaaataaccaaatcggatttacaacaaactattta
gatgcacgtacgtctacttattgtacagatgttgcaaaagtaacattatctcctgtaatg
catgtgaattctgatgatgtagaagcggtggttcatgctttccgttttgcagcagattat
cgtgcacaattcggttctgatgtattcatcgatttattaggataccgtaaatatggacat
aacgaaggtgatgaaccaaaattcactcaaccaaaattatataacatcatctctaaacac
ccaaatcctcgtgaaatttacaaggataaattattgaaagaaggtgtaataggagaagag
attgtaaaacaaaaagaagctgaatttaaagctttattagaaacaaacttcgaagcttct
aaagaaatagaacgtaatcacattttccctttcatgccggaagagtgggaaggatttgaa
attgctgatgatgctaaagtttttgaacaagcgaatacggcttacgacgaagcgaaatta
agagaaattgcaaaagctgtttctacagtaccagaaggtaaaaaattaatcaaaaaagtt
tctcgtttaattgaagggcgtggaaaaatgattgatgaagataaaatcgactggggatta
ggagaagctttagctttcggttctattttaacagacggacgtaatgtacgtgtttctgga
gaagatgtagaacgtggaacattctctcaccgtcatgcggttgtaaaaactgaagacaca
gaagaagaaattatcttattaaaccatatcaataatgagcaaggtcaattacgaatctat
aactcattattatctgaatatgcagttttaggtttcgattatgggtatgcaatggcaaat
ccgaaagcgttaactatttgggaagctcagtttggagatttcgtgaatggagcgcaaatt
gtaatcgaccaatatatttctgcagcagaagataaatggaaattacaaaacggtttagta
atgttattgcctcatggatatgaaggacaaggagcagagcactcttcagcacgtttagag
cgtttcttacaaatgtgtgccggtaacaatatgtttgttgctaacatcacaactccagcc
aacttcttccatgctttaagaagacaggtcgtaacagattaccgtaaaccattggttgta
atgtctccaaaatcattattacgtcatccatcagctgtatcaccattagcagactttgca
aatggaggattccaagaaatcatcgaagatgtaactgtagatgctaaaaaagtgaaaaaa
gtagtattctgttcagggaaaatctactacgatttagacaaaaaacgccatgagttagga
gatacagaaactgcaattattcgtttagagcaactatacccattgaacgaagaaaaagta
gatgcaatcatctctaaatttggtaatgctaaattggtttgggcgcaagaagaaccagaa
aatatgggagcttggatgtacatcttacgtaaattaagaaaatatccattcgacgtcgtt
tctccagcagaaagtgctgccacagcaccaggttcaagcaaacgttgggctgcaatttac
gaagaggtaattaataaagtattcaattaa
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