Pectobacterium atrosepticum SCRI1043: ECA2282
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Entry
ECA2282 CDS
T00186
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ECA2282 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eca03400
]
ECA2282 (nth)
Enzymes [BR:
eca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ECA2282 (nth)
DNA repair and recombination proteins [BR:
eca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ECA2282 (nth)
Prokaryotic type
ECA2282 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CAG75185
UniProt:
Q6D4V8
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All DBs
Position
2585970..2586605
Genome browser
AA seq
211 aa
AA seq
DB search
MNKAKRVEILMRLRDNNPHPTTELNFSTPFELLISVLLSAQATDVSVNKATAKLYPVANT
PEALLTLGVDGVKGYIKTIGLFNSKAENVIKTCRLLLEKHQGQVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTRFAPGKNVEQVEEKLLKVVPAEFKVDCHHWLI
LHGRYTCIARKPRCGSCLIEDLCEFGEKVDA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggccaaacgggttgagatcttaatgcgtttacgcgacaacaatccccatccg
acgactgagttaaacttcagtacgccgtttgaactgctcatctccgtactgctttccgca
caggcaaccgacgtcagcgtcaacaaagcaaccgcaaagctctatcctgtcgccaacaca
ccggaggcgctactcacactcggtgtcgacggcgttaaaggctatatcaagacaatcggt
ctgtttaacagcaaagcggaaaacgtcatcaagacctgccgcctattgctggaaaagcat
caggggcaggttcctgaagatcgtgctgcgttggaagccctacccggcgtaggacgaaaa
acggcaaacgttgttttgaataccgcgtttggttggccgacgattgctgttgatacccat
atctttcgcgtcagtaaccgtacaagattcgcaccaggtaaaaatgtcgaacaggtagag
gaaaaactgctgaaagtcgttccggcagaatttaaagtcgactgccaccactggttaatc
ctacatggccgttacacctgtattgctcgaaaaccacgctgtggttcctgcctgattgaa
gatttatgtgaatttggcgaaaaggtcgacgcctaa
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