Erigeron canadensis (horseweed): 122582770
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Entry
122582770 CDS
T07610
Name
(RefSeq) protein SIEL
KO
K13141
integrator complex subunit 4
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122582770
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
122582770
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Cnd1
PDS5
INTS4_8HBD
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
122582770
NCBI-ProteinID:
XP_043611139
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Position
9:10430590..10444114
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AA seq
930 aa
AA seq
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MEQTFLSDFHQSLHKTQLSNSSSLKPFSIANSLILNPSTSIPTLSSILQTLTQTLNQTLP
IQFHVIIISLLSRLSITHPNFTSSITTTLNSLLTRPTLSPRATSLALSTLVSLTDKPEIL
DMSEGVFLSLCFGSSVSVRHKMMLNVEKFGVRPSVLVTVLLGFSKDPFPYVRKAALDGLV
WLCKCRRVVDFRLVESCYLRGVELLFDSEECVRCSAVKMVCEWGMLIAEISKDESKKDWL
DSLYLQVCEWGKFLVTNSEDKSKRVWSDAVYVQLCLMVRDMSVNVRIEAFKALGRVGMAS
KYVLMQTLFKRFENKLVEQLKGKHFNLQASSAAGAFVHGLEDEFYEVRSAACNSLRMPAI
LSAELAARSLGLLMDVLNDDSTIVRLQALETMHHMAAFGHLKVQEVHLHMFLGTLNDMNS
SVRSTARKVLRLTKLHDLPMFRLVVDSIIQSLEIYPQDEPDVLSLLFEIGRSHGGFAVNI
INEIFLEMDPSSESDWEFNSSKTAARLALAISAPLSHGTRQHLYSIPSTIFSYAVTMLGR
ISNALNEVMNQETLLAYLSHCSRSTIPNSTLPDSMHDKIVEDDVCTEMDNQITLFHVADQ
HEVHDEEYSYVKFVLANIVEIWPLLKMGCISEVLMTLRSWKEELATYITDPHQTDSVLTF
TLQYIHVVKLLSKAWWHVVLPRDVHNKVGDMGYIMQKLERRLGELRYRFIGLSKEEELHI
EELTLVACTMRLSFSDFRLHESALKKLSIYNETSIDTSKFKIEVMSAMQKNDSDTYRFRE
SLEFFSLKPLILGGNMKYMKAEVDIGVNDWSTPLHFVPGLPVGIRLKIRLHNTPIDTKLW
LVMTLSKDLIQYVFIDLKQFEGSDKIREFTFIPPFYRTAKVSSCILRVSIGMECCSEVFC
SFRGHGGPNHEIVYLCKEKEVFLSMVVKKS
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaacattcctttcagatttccaccaatccctccacaaaacccaattatcaaac
tcatcatctctaaaaccgttttcaatcgccaattccttaattctaaacccatcgacttcc
attcccactttatcttcaatcctccaaaccctcacccaaaccctaaaccaaacactccca
attcaattccacgtcatcatcatctccctcctttcccgtctctccatcacccaccccaat
ttcacatcctccatcaccaccacactcaactctctcctcacgcgccccactctctcccca
cgcgccacttcactcgcactttcaaccctcgtctcattaaccgacaaacctgagattctc
gatatgtcggaaggagtgtttctgagcttgtgttttggttctagtgtgtctgtaaggcat
aaaatgatgttaaatgttgagaaattcggtgttagaccatcggttttggttacggttttg
ttagggtttagtaaggatccgtttccgtatgttaggaaagccgcgttggacggtttggtt
tggttgtgtaaatgtagacgtgtagttgatttccgtttggttgaatcgtgttatttgcga
ggtgtcgagttgttgtttgattcagaagaatgtgttagatgctcggccgttaaaatggta
tgtgaatgggggatgcttattgcggagattagtaaggatgaaagtaaaaaagattggtta
gattcgttgtatttacaggtatgtgaatgggggaaatttcttgtcacaaatagcgaggat
aaaagtaaaagagtttggtcagatgcagtgtatgttcagctttgcttaatggtgagggac
atgagtgtgaatgttagaattgaagcttttaaggcccttggtagggtaggaatggcttct
aagtatgttctgatgcaaactctcttcaagagattcgaaaataagcttgttgagcagctg
aaaggaaagcatttcaatttgcaagcatcaagtgctgctggagcttttgtacatgggctg
gaggatgaattttatgaggtacgaagtgctgcatgtaattccttgaggatgcctgccatt
ctttctgctgagcttgctgctagatccttaggtttattgatggatgtgctgaatgatgat
tcaaccattgtcagattacaagctctggaaacaatgcatcacatggcagcttttggccat
ctaaaagtgcaagaagtgcacttgcacatgtttcttggcactctaaatgacatgaattca
tctgtgagatctacagcgaggaaagttcttcgtttaaccaagctccatgacctgcctatg
tttagactagttgttgacagcataatacagagtctagaaatatatccacaggatgagcca
gatgtcctctctcttttgtttgaaattggccgaagtcatggaggttttgctgtcaacatc
attaatgaaatctttttagagatggatccatcttcagaaagtgactgggaattcaatagc
tcaaaaactgctgcacgccttgcattagccatctctgctcccctctcccatggaacacga
caacatttgtacagcataccatcaacaatattttcgtatgctgttaccatgcttggaaga
atttctaatgccttgaatgaagtgatgaaccaggagacacttttagcttatttgtcacat
tgtagtagatcaactatacccaactccacattacctgactctatgcatgataagatagtt
gaagatgatgtgtgtacagagatggacaatcaaatcacactttttcatgtagctgaccag
catgaagtgcatgatgaagaatatagttatgtgaagtttgtgcttgctaatattgtagaa
atttggcctttgttaaagatgggatgcataagtgaagtgcttatgacattgaggagttgg
aaggaagagctagcaacctatataactgatccacaccaaacagattctgttttaacattt
actttacaatatattcatgtggtgaaactcctttcaaaagcatggtggcatgtagtgctt
ccaagagatgtacataacaaggtcggggacatgggctatattatgcagaaattagagagg
agactaggagaattaagatatcgtttcatcgggttgagtaaagaagaggagttgcatatt
gaggagctgacacttgtcgcttgtactatgagactatcattttctgattttcgcttacat
gaatctgctctaaagaaattgtccatttacaatgaaacatcaatagacacttctaaattc
aagattgaagtaatgtcagcaatgcagaaaaatgacagtgacacatatcgttttagggaa
tcgcttgagttcttctccttaaagccacttatattaggtggcaacatgaaatacatgaag
gcagaagtggatattggggttaatgactggtcaactccccttcattttgtgcctggatta
cctgttgggatacgattgaagatcaggctacataatacgcctattgacaccaagttgtgg
ttagtcatgacgctgtcaaaggacttgatccagtatgtgttcattgatttgaaacagttt
gaaggttctgataagattagagagtttacattcattccccccttctacagaactgccaaa
gttagttcttgtatattgagagtgtctataggcatggagtgctgttctgaggtgttttgt
tcttttagaggccatggtgggccaaatcatgagattgtttacctttgcaaggaaaaagaa
gtgtttctctctatggtggttaaaaaatcttag
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