KEGG   Erigeron canadensis (horseweed): 122583098
Entry
122583098         CDS       T07610                                 
Name
(RefSeq) transcription factor PIF1-like
  KO
K16189  phytochrome-interacting factor
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    122583098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ecad03000]
    122583098
Transcription factors [BR:ecad03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    122583098
SSDB
Motif
Pfam: HLH bHLH_SAC51 bHLH_LHW
Other DBs
NCBI-GeneID: 122583098
NCBI-ProteinID: XP_043611470
LinkDB
Position
9:complement(5981723..5989725)
AA seq 539 aa
MHHIVPDDHFEADQEDYLFQDLPKKSTMGGNEDVMELLWHNGQVVIQNQRSPSNVATKKT
ETITGPSHVFMQEDEMASWLHYPSDENSLENYLYNNDLLYPTPPVNPIPLLSPPPPSKII
ASSDSPVYKRSEVELGQPKYTNFLHFGRPNKITRTRSGPGSLTLPANNSKITPTLAINGV
ASNTVPVLESKASRVSDKETYVSVECGGSVSVIGVAGASSTGKEMVTREMSVTSSHGTGC
SGENAGIEPSTQKPPPPTPTDDQKRKRQGTDDNECHCEDVEFEAKCKSHGGSTSTRRSRA
AEVHNLSERRRRDKINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQMQVQMISMGCS
MVPMMYPGVPMAMGMGIGMGMGMDMGINRPIVPYPAILPASSMPNPAAVAAAHVGQHFPV
PGYSISPMPVAGPAVSQAANVAAPIMSSFPPHSQNQPRVPNFTDPFQQYHAVQQTQEQLP
QCQGIGGMPPIAIKPSIISSKDATNLDHHQTDKPSPWIFIITGRMFNKPGFSAPTNFVA
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgcatcatattgttcctgatgatcattttgaagcggatcaagaagattacttatttcaa
gacttgcctaagaaatcaacaatgggaggaaatgaagatgttatggagctattatggcat
aatggtcaagtagtgatccaaaaccaaagatcaccatcaaatgttgcaactaagaagacc
gaaacaattactggaccgtctcatgtttttatgcaagaagatgaaatggcatcttggctt
cattaccctagtgatgaaaattcgttggagaattatttatacaataacgatcttttgtat
cctacgccacctgtcaatccgataccgttactgtcaccaccaccaccctcaaagataatt
gcatcttctgattcgcctgtttacaagcggtcagaagtggaattgggacaaccaaaatat
acaaactttttacattttggcagacctaataaaattaccaggaccagaagtggtcctgga
tcactaactctgccagctaataatagtaagataacgccgactttggctatcaatggtgtc
gcgtctaacacggtaccagtgctagagtctaaagcttcacgtgtgtcagataaagaaaca
tatgtttctgtcgaatgtggtggaagtgtgagtgttattggcgtagcaggtgcgtcatca
acaggaaaggagatggtaacacgtgagatgagcgtgacatcgtctcatggtaccggttgc
tcgggagaaaacgcaggtatcgaaccgtcgactcagaagccaccgccaccgacaccgact
gatgaccaaaaacgcaaaagacaaggcaccgatgacaatgaatgtcattgtgaggacgtc
gagtttgaggcaaagtgcaaatcgcatggtggatcaacctctacaagaaggtctcgtgct
gcggaggttcacaatctatcagaaaggagacgccgagataagattaatgaaaaaatgaag
gcattgcaagaactaatacctcgctgtaataagtctgacaaagcttcaatgttggatgag
gcaatcgagtacttgaaatcgcttcaaatgcaagttcagatgatatcaatgggatgcagc
atggttcctatgatgtacccaggtgtgccaatggctatgggaatgggaataggtatgggt
atgggcatggatatggggattaaccgacccatagttccttatcccgccattctaccagcc
tcatcaatgcccaatccagctgcagtagcagcagctcatgttggtcaacattttccagtt
ccaggatatagcatttccccaatgcctgttgcgggtcctgcagtaagtcaagcagctaat
gttgcggctccaatcatgagttcatttcctccacatagtcaaaaccaaccacgagttccc
aatttcacggatccttttcaacaataccatgctgttcagcagacacaagaacaacttcct
cagtgtcaaggaataggaggcatgcctccgattgcaattaagccaagcatcatcagcagc
aaagatgctaccaaccttgatcatcaccaaaccgataagccaagtccctggatcttcatt
attacagggaggatgtttaacaaaccaggcttttcagcccccactaattttgtagcgtaa

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