Erigeron canadensis (horseweed): 122583098
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Entry
122583098 CDS
T07610
Name
(RefSeq) transcription factor PIF1-like
KO
K16189
phytochrome-interacting factor
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122583098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122583098
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122583098
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
122583098
NCBI-ProteinID:
XP_043611470
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Position
9:complement(5981723..5989725)
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AA seq
539 aa
AA seq
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MHHIVPDDHFEADQEDYLFQDLPKKSTMGGNEDVMELLWHNGQVVIQNQRSPSNVATKKT
ETITGPSHVFMQEDEMASWLHYPSDENSLENYLYNNDLLYPTPPVNPIPLLSPPPPSKII
ASSDSPVYKRSEVELGQPKYTNFLHFGRPNKITRTRSGPGSLTLPANNSKITPTLAINGV
ASNTVPVLESKASRVSDKETYVSVECGGSVSVIGVAGASSTGKEMVTREMSVTSSHGTGC
SGENAGIEPSTQKPPPPTPTDDQKRKRQGTDDNECHCEDVEFEAKCKSHGGSTSTRRSRA
AEVHNLSERRRRDKINEKMKALQELIPRCNKSDKASMLDEAIEYLKSLQMQVQMISMGCS
MVPMMYPGVPMAMGMGIGMGMGMDMGINRPIVPYPAILPASSMPNPAAVAAAHVGQHFPV
PGYSISPMPVAGPAVSQAANVAAPIMSSFPPHSQNQPRVPNFTDPFQQYHAVQQTQEQLP
QCQGIGGMPPIAIKPSIISSKDATNLDHHQTDKPSPWIFIITGRMFNKPGFSAPTNFVA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcatcatattgttcctgatgatcattttgaagcggatcaagaagattacttatttcaa
gacttgcctaagaaatcaacaatgggaggaaatgaagatgttatggagctattatggcat
aatggtcaagtagtgatccaaaaccaaagatcaccatcaaatgttgcaactaagaagacc
gaaacaattactggaccgtctcatgtttttatgcaagaagatgaaatggcatcttggctt
cattaccctagtgatgaaaattcgttggagaattatttatacaataacgatcttttgtat
cctacgccacctgtcaatccgataccgttactgtcaccaccaccaccctcaaagataatt
gcatcttctgattcgcctgtttacaagcggtcagaagtggaattgggacaaccaaaatat
acaaactttttacattttggcagacctaataaaattaccaggaccagaagtggtcctgga
tcactaactctgccagctaataatagtaagataacgccgactttggctatcaatggtgtc
gcgtctaacacggtaccagtgctagagtctaaagcttcacgtgtgtcagataaagaaaca
tatgtttctgtcgaatgtggtggaagtgtgagtgttattggcgtagcaggtgcgtcatca
acaggaaaggagatggtaacacgtgagatgagcgtgacatcgtctcatggtaccggttgc
tcgggagaaaacgcaggtatcgaaccgtcgactcagaagccaccgccaccgacaccgact
gatgaccaaaaacgcaaaagacaaggcaccgatgacaatgaatgtcattgtgaggacgtc
gagtttgaggcaaagtgcaaatcgcatggtggatcaacctctacaagaaggtctcgtgct
gcggaggttcacaatctatcagaaaggagacgccgagataagattaatgaaaaaatgaag
gcattgcaagaactaatacctcgctgtaataagtctgacaaagcttcaatgttggatgag
gcaatcgagtacttgaaatcgcttcaaatgcaagttcagatgatatcaatgggatgcagc
atggttcctatgatgtacccaggtgtgccaatggctatgggaatgggaataggtatgggt
atgggcatggatatggggattaaccgacccatagttccttatcccgccattctaccagcc
tcatcaatgcccaatccagctgcagtagcagcagctcatgttggtcaacattttccagtt
ccaggatatagcatttccccaatgcctgttgcgggtcctgcagtaagtcaagcagctaat
gttgcggctccaatcatgagttcatttcctccacatagtcaaaaccaaccacgagttccc
aatttcacggatccttttcaacaataccatgctgttcagcagacacaagaacaacttcct
cagtgtcaaggaataggaggcatgcctccgattgcaattaagccaagcatcatcagcagc
aaagatgctaccaaccttgatcatcaccaaaccgataagccaagtccctggatcttcatt
attacagggaggatgtttaacaaaccaggcttttcagcccccactaattttgtagcgtaa
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