Erigeron canadensis (horseweed): 122587015
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Entry
122587015 CDS
T07610
Name
(RefSeq) transcription factor PIF7 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122587015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecad03000
]
122587015
Transcription factors [BR:
ecad03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122587015
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
122587015
NCBI-ProteinID:
XP_043615008
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Position
2:41136189..41138583
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AA seq
391 aa
AA seq
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MYRQQEMKQQHPPPPLVPPIMLSDYGVAEITWENGQPTMHGLVSADETLESIVHQATTYY
NQTPNQVNDLPQNEIRPKVPKNNLGGANNIASSSAKWGNSASQSYLKKRPRPSVIVHDQF
FGNLQVEDNVSNSATITSKENDTTMMTWPSSDSPNQSFKSQKTDDDSAGLYGSENQEEEC
RNNEGETVRSHSSRRSRAAAVHNQSERRRRERINQKMKALQKLVPNANKTDKASMLDEVI
DYLKKLQSQVQLMKNMPFPPQQMMMPIPLQLQQQQQQQQQQQQLQMSMLARMGMGFGLQM
GMPGIMPQPAHHPFMAPQTMINPGHVGATSQTIHSRPSTNTTPFSDPHSAFLAQHMNMDM
FNNMAAFYRQQANQGKSMGMDSSQPEHVHGK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtataggcagcaagagatgaagcagcagcatccccctcctcctctagtcccccccatt
atgcttagtgactatggagttgcagaaataacatgggaaaatggtcaaccaaccatgcat
gggctcgtaagtgctgatgagacactagagtccattgttcatcaagctacaacatattac
aaccaaactccaaaccaagtaaatgatttgccacaaaacgagatccggcctaaagttcct
aaaaataatctaggcggggcaaataatattgcatcttctagtgcgaaatggggcaatagt
gcaagccaaagttacctcaagaaaagaccaagaccatctgttattgtacatgatcaattt
tttggaaatttgcaagtagaagataatgttagcaatagtgctacaattacttctaaagag
aatgacactacaatgatgacatggccttcatccgattcgcctaatcagagtttcaagagc
caaaaaacagacgatgactctgctggtctatatggatcggaaaatcaagaagaagaatgc
aggaataatgagggtgaaacagtccggtctcattcaagtaggcgaagcagggctgctgcc
gttcataaccaatccgaacgacgacgaagagaaagaatcaaccagaagatgaaagctctg
cagaagttggtgcctaatgctaataagacggataaagcatcaatgttggatgaagtgata
gattacttaaagaaattacaatcacaagtacagctaatgaagaacatgccatttccacca
caacaaatgatgatgccaattcccctacaactgcaacagcagcagcagcagcaacaacaa
caacaacagcttcagatgtcgatgctggcccgaatgggaatgggatttggccttcagatg
ggtatgcccggaatcatgccccagccagctcatcatccttttatggccccacaaaccatg
attaaccctggacatgtaggcgccacatcacaaacaatccatagtcgcccgtccaccaac
acaactcctttcagtgatccacatagcgcgtttcttgcacaacatatgaacatggatatg
ttcaacaacatggccgctttttatcggcaacaagccaatcagggaaagtcaatgggcatg
gactcgtctcagccagagcatgttcatggcaagtga
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