Erigeron canadensis (horseweed): 122588803
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Entry
122588803 CDS
T07610
Name
(RefSeq) RING-box protein 1-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03420
Nucleotide excision repair
ecad04120
Ubiquitin mediated proteolysis
ecad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122588803
04120 Ubiquitin mediated proteolysis
122588803
09124 Replication and repair
03420 Nucleotide excision repair
122588803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122588803
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122588803
Enzymes [BR:
ecad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
122588803
Ubiquitin system [BR:
ecad04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
122588803
Multi subunit type E3
SCF complex
Ring finger protein
122588803
Cul2 complex
122588803
Cul3 complex
122588803
Cul4 complex
122588803
Cul7 complex
122588803
Cul8 complex
122588803
Cul9 complex
122588803
DNA repair and recombination proteins [BR:
ecad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122588803
TCR (transcription coupled repair) factors
Cul4-CSA complex
122588803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
zf-Nse
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
122588803
NCBI-ProteinID:
XP_043616945
LinkDB
All DBs
Position
2:4142371..4147153
Genome browser
AA seq
113 aa
AA seq
DB search
MDTAGNEGSTSVKKNHNNNDKHFEIKKWNAISLWGWEIDNVERCAICRNHIVAESCIECQ
ANQGTSISSGDKCVVAWGACNHVFHFHCISNWLKTRQVCPLDNTEWEFQKYGQ
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggacacggctggcaacgaaggatccacttccgtaaagaaaaatcataataataatgac
aagcatttcgagatcaaaaaatggaacgctatttctctatggggatgggagatagacaac
gtggagagatgcgcaatttgtaggaaccatatcgtggcggagtcatgtattgaatgtcag
gctaaccaaggcacttccatttccagcggtgacaagtgcgtagttgcttggggggcctgc
aatcatgtgtttcattttcattgtattagcaactggctcaaaacccgtcaagtctgtcca
ttagataacactgaatgggaattccagaagtatggtcagtag
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integrated database retrieval system