KEGG   Erigeron canadensis (horseweed): 122588803
Entry
122588803         CDS       T07610                                 
Name
(RefSeq) RING-box protein 1-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03420  Nucleotide excision repair
ecad04120  Ubiquitin mediated proteolysis
ecad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122588803
   04120 Ubiquitin mediated proteolysis
    122588803
  09124 Replication and repair
   03420 Nucleotide excision repair
    122588803
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122588803
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122588803
Enzymes [BR:ecad01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     122588803
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   122588803
  Multi subunit type E3
   SCF complex
    Ring finger protein
     122588803
   Cul2 complex
     122588803
   Cul3 complex
     122588803
   Cul4 complex
     122588803
   Cul7 complex
     122588803
   Cul8 complex
     122588803
   Cul9 complex
     122588803
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122588803
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122588803
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16 zf-Nse PHD_NSD
Other DBs
NCBI-GeneID: 122588803
NCBI-ProteinID: XP_043616945
LinkDB
Position
2:4142371..4147153
AA seq 113 aa
MDTAGNEGSTSVKKNHNNNDKHFEIKKWNAISLWGWEIDNVERCAICRNHIVAESCIECQ
ANQGTSISSGDKCVVAWGACNHVFHFHCISNWLKTRQVCPLDNTEWEFQKYGQ
NT seq 342 nt   +upstreamnt  +downstreamnt
atggacacggctggcaacgaaggatccacttccgtaaagaaaaatcataataataatgac
aagcatttcgagatcaaaaaatggaacgctatttctctatggggatgggagatagacaac
gtggagagatgcgcaatttgtaggaaccatatcgtggcggagtcatgtattgaatgtcag
gctaaccaaggcacttccatttccagcggtgacaagtgcgtagttgcttggggggcctgc
aatcatgtgtttcattttcattgtattagcaactggctcaaaacccgtcaagtctgtcca
ttagataacactgaatgggaattccagaagtatggtcagtag

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