Erigeron canadensis (horseweed): 122593674
Help
Entry
122593674 CDS
T07610
Name
(RefSeq) cystathionine beta-lyase, chloroplastic-like isoform X1
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00270
Cysteine and methionine metabolism
ecad00450
Selenocompound metabolism
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
ecad01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122593674
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
122593674
Enzymes [BR:
ecad01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
122593674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
GDC-P
Motif
Other DBs
NCBI-GeneID:
122593674
NCBI-ProteinID:
XP_043622047
LinkDB
All DBs
Position
3:complement(35790506..35794973)
Genome browser
AA seq
464 aa
AA seq
DB search
MAAAASSSSCLRSSPIFSAPPSQPLNNTHTAVGVVNIGCTSNRGSAALVLRCSREDRMDM
RASAVAEGIAESFSNSLSETDDKEPSVSTILMNFENKFDPYCAMSTPLYQTATFKQPSAT
ENGPYDYTRSGNPTRDVLESLLAKLDKADRAFCFTSGMAALAAVSRLVKTGDEIVAGEDI
YGGSDRLLSQVVPRTGVIVKRVDTTNLEEVAAAIGPQTKLVWLESPTNPRIQISDIRKIA
EIAHANDAMLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK
ELYFLQNAEGSGLAPFDCWICLRGIKTMALRVEKQQDNAQKIADFLSSHPLVKKVNYAGL
PTHPGRSLHYSQAKGAGSVLSFLTGSLALSKHIVETTKYFGITVSFGSVKSLISMPCFMS
HASIPAEVREARGLTEDLIRISVGIEDVNDLIADLDHALRTGPI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgcttcttcttcatcttgtcttagatcgtcgccgatattctcagctcct
ccatctcaaccactcaacaacactcacacagcagtaggggtggttaatatcgggtgtacg
agcaatcgtggttcggcggcgttggtgttacgctgttcaagggaggacaggatggatatg
agggcatccgctgttgctgaagggatagctgaaagttttagtaattctttatcggagacg
gacgataaggaacctagtgtatcgactatattgatgaattttgagaataagtttgatcct
tattgtgccatgagcacgcctttatatcaaaccgctactttcaaacagccttctgcaact
gaaaatggcccttatgattacaccaggagtggcaatcccactcgtgatgtgttggaaagt
cttcttgcaaagcttgataaagcagatcgagcattttgttttacaagtggaatggctgct
ttagctgcagtcagccgtctagtaaaaactggtgatgaaattgttgctggggaggacata
tatggtggttctgatcgattactgtcacaagttgttccaaggacaggagtcatcgttaag
cgagtagacacaactaacttagaggaggttgctgctgcaattgggccccaaactaagcta
gtatggttggagagtccaaccaatccccgaatacaaatttctgatattcgtaaaatagca
gaaattgctcatgcgaatgatgctatgttattggtcgataatagcataatgtcacctgta
ttgtctcgaccattggagcttggagcagatattgtgatgcattcagcgacaaaattcatt
gcgggacacagtgatgtcatggctggagtgcttgctgtaaagggagaaaggctggcaaaa
gaattgtatttcctacaaaatgcagaaggctctgggctggcaccttttgattgttggatt
tgtttacgtggaatcaagacaatggccttacgtgtcgagaagcaacaagataatgcacag
aagatagcagattttctgtcatctcatccactggtaaagaaggttaattatgctggtctt
cctacccatcctggacgctcattacactactctcaggcaaaaggagcaggatcagtcctg
agtttcttgacagggtcactggctctgtcgaagcatatagtggaaactaccaagtacttc
ggcataactgttagttttgggagtgtaaaatcgctaataagcatgccttgctttatgtcc
cacgcatctataccggcagaggttcgcgaggccagaggtctcacggaagatcttattcgt
atctctgtggggattgaggatgtaaatgacttgattgctgatttggatcatgcactaaga
actggtcctatttag
DBGET
integrated database retrieval system
