Erigeron canadensis (horseweed): 122595421
Help
Entry
122595421 CDS
T07610
Name
(RefSeq) (E)-beta-ocimene synthase, chloroplastic-like
KO
K12742
isoprene synthase [EC:
4.2.3.27
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00900
Terpenoid backbone biosynthesis
ecad01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122595421
Enzymes [BR:
ecad01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.27 isoprene synthase
122595421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_syn_C_2
Terpene_synth
CdaS_N
ARM_CUL7_CUL9
Motif
Other DBs
NCBI-GeneID:
122595421
NCBI-ProteinID:
XP_043623709
LinkDB
All DBs
Position
4:complement(36169453..36172768)
Genome browser
AA seq
572 aa
AA seq
DB search
MVQTNSSHVSIYKRTLWSPDFIQGLETNFSINYKEKVKELEKQVRQMLDNINYENGGELS
STLKVLELIDNLERLGLGYRFQTSITQILNKIAQQDDEDLISWRGVEEDEENILLAVVSL
KFRLLRQHGYRCSAQGFCRRFKDSRGVLAGRLQKNTKALLSIYEASYLALDGETDLNEAK
LFATENLLNKLHNNSGEYEVLMNEQVKHALDIPLYRMMARLEARWYIDAYSKREDANRLL
LELATLNFNMVQSVHKIDLQELSKWWKEIGLTGKLSFIRDRLVECFFASVGIVFEPQYSC
CRIGLTKVCSLINSIDDIYDIYGSLDELKVFTNAVKRWEVSEMECMPEYLQIGFLALYNT
VNEMGYETLITHGKNIIPILSKAWGDLADAFLVEATWTHGNVIPSFEDYLDNAWVSVSGV
LILTHGYFLMNQDFKKDTIESLEKCRDLYKWSSMLLRLYNDLAISSDEIEKEGDANAILC
YMHQHGVCEEVAREYIKTSLVEEIWKKMMEARIACCEQDVDAPLTDIAISLARISYCIYQ
YGDGVKAPDEASAKDRILSIIMEPITIQGIGK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaaactaatagtagtcatgtatctatttacaagcgaactctttggagtcctgat
tttattcaaggattggagaccaatttctcaataaactacaaggagaaggtgaaggagcta
gagaagcaagtgaggcagatgctggataatattaattatgaaaatggtggtgaactgagc
agtactttgaaagtgcttgagctcatagataaccttgaaaggctcggccttggctatcgg
tttcaaaccagcataacccaaatactcaacaaaatagcacaacaagatgatgaagatcta
attagctggcggggagttgaagaagatgaagaaaacatcctgctcgctgtcgtttctctt
aaattcagacttcttaggcaacatggttatagatgttcagcccaaggcttttgtaggaga
ttcaaggacagccgtggtgtgttggcaggacgcctacagaagaacaccaaagcattgcta
agtatatatgaagcttcatatcttgccctcgacggagaaacagatttgaacgaggccaag
ctatttgcgactgagaatttgctaaataagctacataataatagtggtgaatacgaagta
ctaatgaatgagcaagtaaaacatgcactggatattccgttgtaccgtatgatggctagg
ttagaagctaggtggtacatcgatgcttatagtaaacgagaagatgcaaatcgactactg
cttgagcttgctacattaaatttcaacatggttcagtcggtgcacaagatagatcttcaa
gaattatcaaagtggtggaaagaaataggcctaacgggcaagttgagcttcatccgggac
cgactggtggaatgcttctttgcgagcgttggaattgtgtttgaacctcaatactcttgt
tgccgtataggattaacgaaagtctgctccttaattaactcaattgacgacatctatgat
atttatggatctttagatgaactcaaggtcttcacaaatgctgtcaagaggtgggaagtt
agtgaaatggaatgtatgcccgagtatctacaaataggctttctagctctttacaacact
gtcaatgaaatgggttatgagaccttaattactcatggaaaaaacatcataccaatcctt
tctaaagcgtggggagatctagcagatgcattccttgtagaagcaacatggactcatgga
aatgtcataccatctttcgaagattatctggataacgcctgggtatcggtttcaggagtg
cttatacttactcatggctactttttaatgaatcaagatttcaaaaaagatacaattgaa
tccttggaaaagtgtcgtgatctttataaatggtcatcaatgcttcttcgactctacaat
gatttggctatttcatcggatgagatagaaaaagagggtgacgcgaatgcaatattatgt
tacatgcatcaacatggtgtttgtgaggaagttgcgcgcgaatatataaaaactagtcta
gtcgaagaaatatggaagaaaatgatggaagcacgaattgcttgttgtgaacaagatgtg
gacgctccattgacggatatagccattagccttgctagaatttcatactgtatctatcaa
tatggggacggagttaaagcaccagatgaggcttcagccaaggatcggatattgtccatc
attatggagcccattactatacaagggatcggaaaataa
DBGET
integrated database retrieval system
