Erigeron canadensis (horseweed): 122599203
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Entry
122599203 CDS
T07610
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122599203
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122599203
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122599203
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
122599203
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122599203
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122599203
Prokaryotic type
Other AARSs
122599203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
zf-FPG_IleRS
tRNA-synt_1e
Glyco_hydro_36
Motif
Other DBs
NCBI-GeneID:
122599203
NCBI-ProteinID:
XP_043627602
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All DBs
Position
5:complement(35414901..35425470)
Genome browser
AA seq
1072 aa
AA seq
DB search
MAMQSSHTVLSLRSCSSFRKSSSFNIIDFRRCSSIELSSIFHFTYCYISPRKAFCTQSKR
RSRGPVMAAKKESKGTKQGDGKYKHTVDLPKTTFGMRANSAVREPEIQKLWDENQIFKKV
AEKNNGGSFVLHDGPPYANGDLHMGHALNKIIKDIINRYKLLQNYNVHYIPGWDCHGLPI
ELKVLQSLDQDARKGLTPIKLRAKAAKFAKATVKSQMASFKRFGVWADWDHPYLTLDPEY
EAAQIEVFGQMVFKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHVSKSMYAIFKVLNTP
TKSGLLDEFLPKLSLAIWTTTPWTIPANAAVAVNSKLQYAIVELQPHSPEVASSSEDGKR
RFGSVLKAQLIPFFIVALDLVPTLEAKWGVKLVVKKTVLGSDLENCRYAHPISGEECPVV
IGGDYITTESGTGLVHTAPGHGQDDYLTGLKYGLPIVSPVDDEGKFTQEAGIFSGLDVLG
DGNAAVIDHLDEGSSIIMVEPYKHKYPYDWRTKKPTIFRATAQWFASVEGFRDAAMDAIN
QVTWTPSQAENRISTMTSSRSDWCISRQRTWGVPIPVFYHAKTKEPLLNEETVDHIKSII
SQKGSDAWWYMSVEELLPESYRDKASNYVKGTDTMDVWFDSGSSWAAVLETRNGLRYPAD
LYVEGTDQHRGWFQSSLLTSVATKGRAPYYGVITHGFVLDERGFKMSKSLGNVVDPRTII
EGGKNQEEAPSYGADVLRLWVSSVDYTGDVLIGPQVLRQMSDIYRKLRGTLRFLLGNLHD
WRAENAIAYEELPEIDQHALFQLENVVKNIKESYESYQFFKIFQIIQRFAIVDLSNFYFD
VAKDRLYVGGASSFTRMSCQTVLAAHLLSIARVIAPILPHLAEDVWQNLPFEYNIDNNEV
AKFVFESKWPTVNERWFAFPEEEIDLWGKILELRTEVNKALETARTGKLIGSSLEAKVYL
HSSDDNLAVRLKKMCEAKVDADSLHRIFITSQVEILSALEDAPSKDIPYSGEYLIQGDKK
IWVGVSRAEGSKCERCWNFSTQVGSFLDHPTLCKRCYDVVAGQPLPALAAVS
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcaatcttctcatacagttctatcactgagaagttgctcatcctttagaaag
tcatcttcttttaacatcattgacttccgaagatgctcgtccattgagctttcatctatc
ttccattttacatattgctatatttctcctagaaaagccttttgcactcagtcaaagcga
aggtctcgtggacctgtaatggccgccaagaaagaatccaaaggaacaaagcaaggagat
ggaaagtacaagcatactgtcgaccttcctaaaacaacttttggtatgagagcaaattct
gctgtaagggaaccagaaatccagaaattatgggatgaaaatcaaatttttaagaaagtt
gctgaaaaaaataatgggggaagttttgttcttcatgatggccctccttatgctaatggt
gatttacacatgggacatgcattaaacaagattataaaggatattattaaccggtataag
cttctacaaaactataatgtacattacattcctggttgggattgccatggtttaccaata
gagttaaaagtgttgcagtcattggaccaagatgctcgaaaggggttaacaccaataaag
ttgagagccaaagcagctaaatttgccaaagcaactgtaaagtcacaaatggcatcattc
aagagatttggagtatgggctgactgggatcatccttatctcactcttgatccagaatat
gaggctgctcagattgaagtgtttggccagatggtttttaaagggtacatatatcgtggt
agaaagccagtgcactggagtccttcctcccgcactgctcttgcagaggctgagttagag
tatccggaaggccatgtttcaaagagcatgtatgcaatttttaaagtattaaatactcca
acaaaaagtggtttacttgatgaatttcttcccaaattgtcccttgcaatctggaccacc
actccctggactattcctgccaatgctgctgttgcagtgaattccaagctccagtatgca
attgttgaattacagccccattcacctgaggttgcttcatcttctgaagacgggaagaga
aggtttggtagtgttttgaaagcccaactgataccatttttcattgttgcactggacctt
gtgccaacactggaagccaaatggggcgtgaagcttgttgttaaaaaaacagttttgggt
tcagatcttgaaaattgcagatatgcacacccaataagtggggaagaatgtcccgttgtc
attggaggagattatatcacaacagaatcaggaactgggctggtccacacagccccaggt
catgggcaggatgattatttaactgggttaaaatatggtctacctatagtatccccagtg
gacgatgaaggaaagttcactcaagaagctgggatctttagtgggcttgatgtattaggt
gatggaaatgctgctgtaattgatcatttggatgaaggttcatcaattatcatggtggaa
ccatacaagcacaaatatccttatgattggagaaccaaaaaaccaaccatttttagggca
acagcacaatggtttgcgtctgttgaaggatttagagatgctgctatggatgcgattaac
caagtaacatggaccccatcacaggcagaaaacagaatttctacaatgacttccagccgt
tcagattggtgtatatcgcgtcagaggacatggggtgtcccaattccagtcttttatcat
gccaagacaaaggaacctttgttgaatgaagagactgttgatcatataaaatcaattatt
tcccaaaagggtagcgatgcatggtggtacatgtctgtagaagagttgcttccagaaagt
tatcgtgataaagcatctaattatgtaaagggaactgataccatggatgtttggttcgat
tcaggctcttcttgggctgctgttttggaaactagaaatggcctaagatatcctgcagat
ttgtatgttgaaggtaccgatcagcatcggggttggtttcaaagttctttactgactagt
gttgcaacaaaaggaagagctccgtattatggggttataacccatggatttgttttagat
gagaggggttttaagatgagtaaatctttgggcaatgtcgttgatccacgtactataatt
gaaggggggaagaatcaagaggaagcaccatcttatggtgcagatgtgcttcggctctgg
gtctcaagtgtagattatacaggagacgttcttattggtccgcaagtcctccgtcaaatg
tctgacatatatagaaagctgagaggaacattacggtttctattgggaaatcttcatgat
tggagagctgaaaatgctattgcatatgaggaacttcctgagattgatcagcatgctctg
tttcagcttgaaaatgttgtgaaaaatatcaaagaaagctacgagagctatcagttcttc
aaaattttccagatcattcaacggtttgccattgttgatctctcaaatttctattttgat
gttgccaaagatcgcctttatgttgggggtgcttcaagtttcacaagaatgagttgtcaa
acagtgcttgcagctcatctactctccatagcgagagtaattgcaccaatactacctcat
ttggcggaggatgtgtggcaaaatctcccattcgagtataatattgacaacaatgaggta
gccaagtttgtttttgagtcaaaatggcccacagtaaatgaaagatggtttgccttccct
gaagaagaaattgatttatgggggaaaatacttgagctgagaactgaggtaaacaaagca
ttggagactgctcgaactggcaaactaattggttctagcctggaggcaaaggtgtacctc
catagttctgatgataaccttgctgtgagattaaagaagatgtgtgaagctaaagttgat
gcagactcactgcaccgcatattcataacatctcaggttgagattctttctgccttggag
gacgcaccaagcaaagatataccatactctggggaatatttaattcaaggagacaagaaa
atatgggttggtgtatcacgtgccgaaggttcaaagtgtgaaagatgctggaacttctca
actcaagttggctcttttcttgatcatccgacactttgtaaacgttgctatgatgttgtt
gctgggcagccacttcctgctcttgcagctgtgagttga
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integrated database retrieval system
