KEGG   Erigeron canadensis (horseweed): 122599555
Entry
122599555         CDS       T07610                                 
Name
(RefSeq) GTP-binding nuclear protein Ran1A-like
  KO
K07936  GTP-binding nuclear protein Ran
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03008  Ribosome biogenesis in eukaryotes
ecad03013  Nucleocytoplasmic transport
ecad03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122599555
   03008 Ribosome biogenesis in eukaryotes
    122599555
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    122599555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecad03019]
    122599555
   03009 Ribosome biogenesis [BR:ecad03009]
    122599555
   03016 Transfer RNA biogenesis [BR:ecad03016]
    122599555
   03036 Chromosome and associated proteins [BR:ecad03036]
    122599555
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecad04147]
    122599555
   04031 GTP-binding proteins [BR:ecad04031]
    122599555
Messenger RNA biogenesis [BR:ecad03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     122599555
Ribosome biogenesis [BR:ecad03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    122599555
  Pre-60S particles
    122599555
Transfer RNA biogenesis [BR:ecad03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    122599555
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     122599555
   Spindle formation proteins
    122599555
Exosome [BR:ecad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122599555
GTP-binding proteins [BR:ecad04031]
 Small (monomeric) G-proteins
  Ran Family
   Ran
    122599555
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RNA_helicase GTP_EFTU Gtr1_RagA G-alpha ATPase AAA_7 Pox_A32 AAA_24 Septin AAA_16 AAA_29
Other DBs
NCBI-GeneID: 122599555
NCBI-ProteinID: XP_043628013
LinkDB
Position
5:2140592..2143608
AA seq 221 aa
MALPNQQSVDCPSFKLLIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNLG
KVRFSCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRQTYKNVPTWHHDLCRVCDNIPI
VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV
ESPALAPPEFQIDLDERKRIEAELENSIRQPLPDNDEDLFD
NT seq 666 nt   +upstreamnt  +downstreamnt
atggctctaccgaatcaacagagtgtcgattgtccaagctttaagctcctcattgtcggc
gatggaggaactgggaagacgaccttcgttaaaaggcatctcactggtgaatttgagaag
aagtacgaacccactattggagttgaagttcacccattggacttcaccacaaatctcggg
aaagttcgtttctcatgctgggatactgcaggacaagagaagtttggtggccttcgagat
ggttactacatccatggtcaatgtgctattataatgtttgacgtcacatccaggcagact
tacaagaacgtccctacatggcatcatgatctctgcagggtctgtgacaatattccaatt
gttctttgtggaaacaaggttgatgtgaaaaacaggcaggttaaagcaaagcaggttacg
ttccacaggaagaagaatctgcagtactatgagatctccgcaaaaagcaactacaacttt
gaaaagcctttcttgtaccttgccaggaagcttgctggggaccctaaccttcattttgtg
gagtcacctgccctcgctcctccagaatttcaaattgaccttgatgaacgaaaaaggatt
gaagcagagcttgaaaatagtattcgccaaccattgccagataatgatgaagacctattc
gactga

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