Erigeron canadensis (horseweed): 122600311
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Entry
122600311 CDS
T07610
Name
(RefSeq) NHP2-like protein 1 isoform X1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03008
Ribosome biogenesis in eukaryotes
ecad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122600311
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122600311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122600311
03009 Ribosome biogenesis [BR:
ecad03009
]
122600311
Spliceosome [BR:
ecad03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122600311
Ribosome biogenesis [BR:
ecad03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
122600311
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
122600311
NCBI-ProteinID:
XP_043628953
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All DBs
Position
5:2339895..2343377
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AA seq
129 aa
AA seq
DB search
MQTGEAVNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAAD
AEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVISCSVTSNEGSQLRSQIQQL
KDAIEKLLI
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaggagaagcagtaaacccaaaagcatacccattagcagatgctcagcttaca
atcactattttggatcttgttcagcaagctgctaattacaaacaactcaaaaagggtgcc
aatgaagctacgaagaccctgaacaggggcatttctgaatttgtagtgatggccgcagat
gctgaacctcttgaaattcttcttcatcttccccttcttgccgaagataagaatgttccc
tatgttttcgtcccttcgaaacaagcattggggagagcatgtggagttacaagaccggtg
atttcatgttctgtgactagtaatgaaggaagtcaactgagatcccaaatccagcagctt
aaggatgccattgagaagctcttgatctaa
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