Erigeron canadensis (horseweed): 122600912
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Entry
122600912 CDS
T07610
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial-like
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00020
Citrate cycle (TCA cycle)
ecad00785
Lipoic acid metabolism
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
ecad01200
Carbon metabolism
ecad01210
2-Oxocarboxylic acid metabolism
Module
ecad_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ecad_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
122600912
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
122600912
Enzymes [BR:
ecad01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
122600912
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
122600912
NCBI-ProteinID:
XP_043629624
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Position
5:complement(2560824..2568774)
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AA seq
1023 aa
AA seq
DB search
MTWFRAGSSVAKLAIRRTLSQGGSYASRKRVVPFGTQEFHTTVLKSKAQSAPVPRAVPLS
RLSDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATSPGISGQTIQESMR
LLLLVRAYQVYGHMKAKLDPLGLEQREIPDDLDPALYGFSEADLDREFFLGVWRMSGFLS
ENRPVQTLRAILTRLEQAYCGSIGYEYMHIANREQCNWIRDRIETPTLMAYNSQRREVIL
DRLIWSTQFENFLATKWTAAKRFGLEGGETLIPGMKEMFDRSADLGVESIVIGMSHRGRL
NVLGNVVRKPLRQIFSEFSGGTRPVEEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV
ANPSHLEAVDPVVVGKTRAKQYYSNDVDRTKNMGILIHGDGSFAGQGVVYETLHLSALPN
YTTGGTIHIVVNNQVAFTTDPKSGRSSQYCTDVAKALNAPIFHVNGDDVEAVVHACELAA
EWRQTFHSDVVVDIICYRRFGHNEIDEPSFTQPKMYKVIRNHPSALEIYQKKLLETGQAT
KEDIDRIHNKVTTILNEEFLASKDYIPQTRDWLSAYWAGFKSPEQLSRIRNTGVKPEILK
NVGKAIATLPDNFKPHRAVKKIFADRLKMIETGEGVDWAVGEALAFATLLVEGNHVRLSG
QDVERGTFSHRHSIIHDQETGERYCPLDHVVMNQHEEMFTVSNSSLSEFGVLGFELGYSM
ENPNSLVIWEAQFGDFANGAQVIFDQFLSSGEAKWLRQIGLVLLLPHGYDGQGPEHSSAR
LERFLQMSDDNPFVIPEMEPTLRNQIQTCNWQVVNVTTPANYFHVLRRQIHREFRKPLIV
MAPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQSEHSDLEEGIRRLVLCSG
KVYYELDEKRKSTGGKDIAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYT
YIAPRLATAMKAVNRGSLDDIKYVGRAPSAATATGFYTVHGKEQSELVEKAITSDSLINP
TVS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgacgtggtttagagctggatctagtgtggcaaagcttgcaattagaagaacgttgtca
cagggtggatcatatgcatcaaggaaacgtgttgttcctttcggaacccaagaattccat
actacagttttgaaatcaaaagcacagtctgcacccgtcccccgtgctgttccactctca
cgtttaagtgatagttttcttgacgggactagtagtgtctatctagaagagcttcagaga
gcctgggaggctgacccaaatagtgtcgatgagtcatgggacaatttctttcgaaacttt
gttggccaggctgctacatccccaggaatatcaggccaaacaatacaggagagcatgcga
ttgctattgctcgtgagagcttaccaagtctatggccacatgaaggcaaaattggatcct
ttaggcctagaacagagagagattcctgatgatttagacccagctctgtatggtttcagt
gaagctgatttagaccgcgagttttttctcggtgtatggagaatgtctggttttttgtct
gaaaatcgtcccgtccagacgctaagagctatattaaccaggcttgagcaggcatattgt
gggagcattggctatgaatacatgcacattgccaatcgtgaacaatgtaattggataaga
gacagaatcgagactccaactttaatggcatataacagtcagcgacgtgaagttatcctt
gataggcttatttggagcactcagtttgagaacttcttggccaccaagtggactgctgcc
aagcggtttggtctcgaaggcggtgagacattaatcccggggatgaaagaaatgtttgac
cggtctgcagatcttggtgttgagagcattgtgattggaatgtctcacagaggaagactg
aatgttttaggtaatgttgtgcgtaaaccattacgtcagattttcagtgaatttagtggt
ggcacgaggcctgtggaagaagttgggctctacactggaactggtgatgtcaaatatcat
cttggaacatcttatgatcgcccaacaagaggtgggaagagaattcatttgtctctagtt
gcaaacccaagtcatttggaagctgtggatcctgtagtagttgggaaaactagagcgaaa
cagtattactcaaatgatgttgataggaccaagaacatgggtatcttgattcatggggat
ggaagcttcgcgggtcaaggtgtggtctatgagactttgcatcttagtgcacttccaaat
tatacaaccgggggtaccatccacatcgtggtgaataatcaagttgcttttaccactgat
ccaaagtctggaagatcttcacagtattgtaccgatgttgctaaagctttgaatgctcct
attttccatgtcaatggtgatgatgtagaagcagttgttcatgcttgtgagcttgctgca
gagtggcgccagactttccattctgatgttgtggttgacataatttgttatcgtcgattt
ggacataatgagatcgatgaaccatcgtttacccagcccaaaatgtacaaggttatccga
aatcacccctcagcacttgaaatttaccaaaagaagctcctagaaactggtcaagctaca
aaagaagatatagatagaatacataataaggttactacaatcctcaacgaagaatttctt
gccagcaaagattatatccctcaaacaagggattggctttcagcttattgggccggattc
aaatcccctgaacagctttcacgtattcgcaacactggggtcaaaccagagatcttgaag
aatgttggaaaagcaattgcaacccttccagataattttaagccacacagagcagttaaa
aaaatttttgccgatcggttgaagatgatcgaaactggtgagggtgttgactgggctgtt
ggggaagcccttgcttttgccaccttgttggttgaaggcaatcatgttaggttgagtggc
caagacgttgaaagaggtactttcagtcataggcattctataatccatgaccaggaaacg
ggtgagcgttattgccctttggaccacgttgttatgaatcaacatgaagaaatgtttacc
gtaagcaacagctctctctcggagtttggtgttcttggatttgaactaggttactcaatg
gagaatccaaattcgctggtaatatgggaagctcaatttggtgactttgctaatggagct
caggtgatttttgatcaattcttgagcagcggtgaggccaaatggctgcgtcagatcggg
ttagtattgttgctgcctcatggttatgatggtcagggtccagaacattctagtgcaaga
ctggaacgcttccttcagatgagtgatgacaatccatttgttatacctgagatggagcca
actctacgcaatcaaattcaaacgtgcaattggcaggttgtcaatgttaccactcctgca
aactatttccatgttcttcgtaggcagattcatagggaattccgtaagccacttattgtt
atggccccaaagaacttactacgtcacaaagactgcaagtcgaatctatctgagtttgat
gatgttcaaggccaccctggctttgacaaacaaggaaccagatttaagcgcctgattaag
gatcagagcgaacactcagatctcgaagagggcatcagacgtttagttctatgttctgga
aaggtttattatgaacttgatgaaaagaggaagtcaactggaggcaaagacatagcaatc
tgtcgtgtggaacagctttgcccattcccttatgacctcatacagcgtgaactaaagcgt
tatccaaatgcagagattgtatggtgccaggaggagcccatgaatatgggagcctacaca
tacatcgcccctcgtcttgcaaccgccatgaaagcagttaatagaggtagtttagacgac
atcaaatatgtgggtcgtgctccatcagctgccacagctaccggtttctatacggttcat
ggtaaagaacagtcagagcttgtcgagaaagctataacatctgattccctcatcaatccc
acagttagctag
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