KEGG   Erigeron canadensis (horseweed): 122607398
Entry
122607398         CDS       T07610                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03420  Nucleotide excision repair
ecad04120  Ubiquitin mediated proteolysis
ecad04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122607398
   04120 Ubiquitin mediated proteolysis
    122607398
  09124 Replication and repair
   03420 Nucleotide excision repair
    122607398
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ecad04121]
    122607398
   03400 DNA repair and recombination proteins [BR:ecad03400]
    122607398
Enzymes [BR:ecad01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     122607398
Ubiquitin system [BR:ecad04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   122607398
  Multi subunit type E3
   SCF complex
    Ring finger protein
     122607398
   Cul2 complex
     122607398
   Cul3 complex
     122607398
   Cul4 complex
     122607398
   Cul7 complex
     122607398
   Cul8 complex
     122607398
   Cul9 complex
     122607398
DNA repair and recombination proteins [BR:ecad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122607398
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122607398
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 122607398
NCBI-ProteinID: XP_043636298
LinkDB
Position
7:complement(1866677..1869408)
AA seq 116 aa
MDSDVTMVPAGETSTIPAGPSSSSKKPKRFEIKKWNAVALWAWDIVVDNCAICRNHIMDL
CIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 351 nt   +upstreamnt  +downstreamnt
atggattccgatgtaaccatggtcccggccggcgaaacctcaactattccggctggacct
tcatcttcttcgaagaaacctaaaaggtttgaaataaaaaagtggaacgctgttgctctt
tgggcttgggatattgttgtcgataattgtgctatctgcagaaaccatatcatggatctc
tgtattgaatgccaagctaatcaggccagtgctactagtgaggagtgtactgtggcatgg
ggtgtctgcaaccatgcttttcactttcattgcatcagtcgttggctaaagacccgccaa
gtttgcccactagacaacagcgagtgggagttccaaaagtatggtcattag

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