Equus caballus (horse): 100049793
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Entry
100049793 CDS
T01058
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecb04040
]
100049793 (SCN4A)
Ion channels [BR:
ecb04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100049793 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
100049793
NCBI-ProteinID:
NP_001075230
Ensembl:
ENSECAG00000005968
VGNC:
22738
UniProt:
Q28371
F7CKF4
LinkDB
All DBs
Position
11:15432010..15478424
Genome browser
AA seq
1834 aa
AA seq
DB search
MASSSLPNLVPLGPESLRPFTRASLAAIERRALEEEARLQRNKQMEIQETERNARSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSNKKTFIVLNKGKAIFRFSATPALYMLSPFSII
RRSAIKVLIHSLFSMFIMITILPNCVVMTMSDPPPWPIHVENTFTGINTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPQPFNDTNTTWYGNDTW
YSNDTWNSNDTWSSNDMWNSHESMASNYTFDWDAYINDEGNFYFLEGAKDALLCGNSSDA
GHCPEGYKCIKTGRNPNYGYTSHDTFSWAFLALFRLMIQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVTMAYAEQNEATLAEDQEKEEEFQQMMEKFQKQQEELEKAK
ADQALEGGEAGGDPAHSKDCNGSLDTSPGEKGPPRQSCSADSGVSDAMEELEEAHQKCPP
WWYKCAHKVLIWNCCTPWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHF
DKVLTVGNLVFTGIFTAEMVLKLIALDPYEYFQQGWNVFDSIIVTLSWVELGLVNVKGLS
VLRSFRLVRSLKLAKSWPTLNMFIRIIGNSGGGLGNLTLVLAIIVVNFSVVGMQLFGKNY
KECVCKNASDCALPRWKMCDFFHSFLIVLRILCGEWIEPMWGFMEVAGQAMFLTVLLMVM
VNGNLVDLDLFLALLLNPLNSDNLSASDEDGEMNNLQISSWPIKLGICFANAFLLGLLHG
KILSPKDIMLSLGDPGEAGEAGEAEESAPEDEKKEPPPEDDDKDLKKDNHILNHMGLVDG
TPTSIELDHLNFINNPYLTIHVPIASEESDLEMPTEEETDTFSEPEDGKKPLQPLDGNSS
VCSTADYKPPEEDPEEQAEENPEGEQPEECFTEACVQRFPCLSVDISQGRGKMWWTLRRA
CFKIVEHHWFKTFNSSLILLNSGTLAFEDIYIEQRRVIRTILEYADKVFTYIFIMEMLLK
WVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIMNVLLVCLIFWVIFSIMGVNLFAAKIYYFINTTTSERFDISGV
NNKSECESLIHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYSAVDSREQEEQP
QYEVNIYMYLYFVIFIIFGSFFTINSLIRLIIVNFNQQKKKLGGKDIFMTEEQKKYYNAM
KKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDITIMILICLNMVTMMVETDDQSQLKVD
ILYNINMVFIIVFTGECVLKMFALRQNYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVS
PTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLILVMFIYSIFGMSN
FAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTS
VRGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSDPLGEDDFEIFFEK
WEKFGPDATQFIDYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFAL
TKEVLGDSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKQEEVCAIKIQRAYRRHLL
QRSVKQASYMYRHSQDGSGDGAPEKEGLIANTMSKMYGRENGNSGVQNKGEERGSTGDAG
PTMGLTPINPSDSALPPSPPPGLPLHPGVKESLV
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcatctctgcccaacctggtgcctctgggccctgagagcctgcgccccttc
acccgggcgtccctggcagccatagaacggcgggcgttggaggaggaagcccggctgcag
cggaacaagcagatggagatccaggagactgagcggaacgcgcgcagtgatctggaggct
ggcaagaacctgcctctcatctatggggaccctccaccagaggtcatcggcatccctctg
gaggatctggacccctactacagcaacaagaagaccttcatcgtgctcaacaagggcaag
gccatcttccgcttctccgctacacctgctctctacatgctgagtcccttcagcatcatc
agacgcagcgccatcaaggtgctcatccactcgctgttcagcatgttcatcatgatcacc
atcttgcccaactgcgtggtcatgaccatgagtgacccgcctccctggcccatacatgtg
gagaacaccttcacaggaatcaacacctttgaatccctcatcaagatgctggcccgaggc
ttctgcatcgacgatttcacattcctccgggatccctggaactggctggacttcagtgtc
atcatgatggcgtacctgacagagtttgtggacttgggcaacatctcagccctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacggtcatcccagggctgaagacgattgtg
ggggccctgatccagtcggtgaagaagctgtcagatgtgatgatcctcaccgtcttctgc
ctgagtgtctttgccctggtggggctgcagctctttatgggaaacctgcggcagaagtgt
gtgcgctggccccagcccttcaacgacaccaataccacctggtacggcaatgacacctgg
tacagcaatgacacgtggaacagcaatgacacgtggagcagcaatgacatgtggaacagc
catgagagcatggccagcaactatacctttgactgggatgcctacatcaatgatgaaggg
aacttctacttcctggagggtgccaaggatgccctgctctgtgggaacagcagtgatgct
gggcactgccccgagggttacaagtgcatcaagactgggcggaaccccaactacggctac
accagtcacgacaccttcagctgggccttcctggctctcttccgcctcatgatacaggac
tattgggagaacctcttccagctgacccttcgagcagccggcaagacctacatgatcttc
tttgtggtgatcattttcctgggctccttctacctcatcaatctgatcctagcagtggta
accatggcgtacgcggagcagaatgaggccaccctggctgaggatcaggagaaagaagag
gagtttcagcagatgatggagaaattccaaaagcagcaggaggagctggagaaggccaag
gctgatcaggctttggaaggtggggaggcaggcggggacccagcccacagcaaagactgt
aacggcagcctggacacatcaccaggggagaaggggcccccaaggcagagctgcagcgca
gacagcggcgtctcagatgctatggaagagctggaagaggcccaccagaagtgcccgcca
tggtggtacaagtgtgcccacaaagtgctcatatggaactgctgcaccccatgggtgaag
ttcaagaacatcatccacttgatcgtcatggatccctttgtggacctgggcatcaccatc
tgcatcgtactcaacaccctcttcatggccatggaacattaccccatgacggagcacttt
gacaaagtgctcaccgtgggcaacctggtcttcacgggcatcttcacagccgagatggta
ctgaagctcatcgccttggacccctacgagtacttccagcagggttggaacgtctttgac
agtatcatcgtcaccctcagttgggtggaactgggcctggttaatgtgaaggggctgtct
gtgctccgctccttccgtctggtgcggtcgttgaaactggccaagtcgtggccaacactg
aacatgttcatcagaatcatcgggaactcggggggggggctgggcaacctgaccctggtg
ttggccatcatcgtggtcaacttttccgtcgtgggcatgcagctgttcggcaagaactac
aaggagtgtgtgtgcaagaatgcctcggactgcgcccttccccgctggaaaatgtgcgac
ttcttccactctttcctcatcgtcctccgcattctgtgtggggagtggatcgaacccatg
tggggcttcatggaggtggctggccaggccatgttcctaaccgtcctcctcatggtcatg
gtcaacggcaacctggtggacctggacctcttcctggcccttcttctgaaccccctcaac
tctgacaacctctcggcctcggacgaggatggcgagatgaacaacctccagatctccagc
tggcccatcaagttgggcatctgctttgccaacgccttcctcctggggctgctgcatggc
aagatcctgagccccaaggatatcatgctcagcctgggggacccgggcgaggctggggag
gcaggggaggctgaggagagtgcccccgaggatgagaagaaggagccaccgcctgaggat
gatgacaaagacctgaagaaggacaatcacatcctgaaccacatgggcctggttgatggc
actccaaccagcatcgagctggaccacctcaacttcatcaacaacccctacctgaccatc
cacgtccctattgcctccgaggagtctgacctggagatgcctacagaggaggagactgac
actttctcagagcctgaggatggcaagaagccactacagcccctcgacgggaactcctcc
gtctgcagtacggccgactacaagccccccgaggaggaccccgaggaacaggccgaggag
aaccctgagggggagcagcctgaggagtgcttcaccgaggcctgtgtgcaacgctttccc
tgcctctccgtggacatctcccagggccgtgggaagatgtggtggaccctccgcagggcc
tgcttcaagattgtcgagcaccactggtttaagaccttcaattcctcattgatcctgctc
aacagtggaaccttggccttcgaggacatctacatcgagcagcggcgagtcatccgcacc
atcctggagtacgctgacaaggtcttcacctacatcttcatcatggagatgctgctcaag
tgggtggcttacggcttcaaggtatacttcaccaacgcctggtgctggctcgacttcctc
atcgtggacgtctccatcatcagcctagtggccaactggctgggctactccgagctggga
cccatcaaatccctgcggacactgcgtgccctgcgtcccctgagggcactgtcccgcttc
gagggcatgagggtggtggtgaacgccctcctaggcgccatcccctccatcatgaatgtg
ctgcttgtctgcctcatcttctgggtgatcttcagcataatgggcgtcaacctgtttgcg
gccaagatctactacttcatcaacaccaccacctccgagagattcgacatctccggggtc
aacaacaagtccgagtgcgagagcctgattcacacaggccaggtccgctggctcaatgtc
aaggtcaactacgacaacgtgggtctgggctacctctccctcctccaggtggccaccttc
aagggctggatggacatcatgtattcagccgtagactctcgggagcaggaggagcagccg
cagtatgaggtgaacatctatatgtacctctatttcgtcatcttcatcattttcgggtcc
ttctttacaatcaactccctcatccgcctgatcattgtcaacttcaaccagcagaagaag
aagcttggagggaaagacatcttcatgacggaggaacagaagaaatactataatgccatg
aagaagcttggctccaagaagcctcagaagccaattccccggccccagaacaagatccag
ggtatggtgtatgactttgtgacgaagcaggtgttcgacatcacgatcatgatcctcatt
tgcctcaatatggtcaccatgatggtggagacggacgaccagagccagctcaaggtggac
atcctgtacaacatcaatatggtcttcatcatcgtcttcacgggggagtgtgtgctcaag
atgttcgccctgcgccaaaactacttcaccgttggctggaacatcttcgacttcgtggtt
gtcatcctgtccattgtgggcctcgcactctccgacctgatccagaaatacttcgtgtca
cccacactgttccgtgtgatccgcctggcacggatcgggcgcgtcctgcggctgatccgt
ggggccaagggcatccggacgctgctctttgccctcatgatgtcactccctgccctcttc
aacattggcctgctcctcattctggtcatgtttatctactccatcttcggcatgtccaac
tttgcctatgtgaagaaggagtcaggcatcgatgacatgttcaactttgagacctttggc
aacagcatcatctgcctcttcgagatcaccacgtcagctggctgggacgggctcctcaat
cccatcctcaacagcgggccccctgactgtgaccccacactggagaacccgggcaccagt
gtcaggggtgactgcggcaacccctccatcggcatctgcttcttctgcagctacatcatc
atctccttcctcatcgtggtcaacatgtacattgccatcatcctggagaatttcaacgtg
gctaccgaggagagcagcgaccccctgggtgaggacgactttgagattttctttgagaaa
tgggagaagtttggccctgacgccacgcagttcattgattatagccgcctctctgacttc
gtagacaccttgcaggaaccactgaggatcgccaagcctaacaagataaagctcatcacg
ctggacctgcccatggtgcccggcgacaagatccactgcctggacatcctctttgccctg
accaaagaggtcctgggtgactctggggaaatggatgccctcaaggagaccatggaggag
aaattcatggcagccaacccatccaaggtctcctatgagcccatcaccaccaccctcaag
aggaagcaggaggaggtgtgcgccatcaagatccagagggcctaccgccggcatctgctt
cagcgctctgtgaagcaggcatcctacatgtaccgccacagtcaggacggcagcggggat
ggggcccccgagaaggagggactgatcgccaacaccatgagcaagatgtatggccgtgag
aatgggaacagtggtgttcagaacaagggtgaggagaggggctcaacaggggatgctgga
cctaccatggggctcacacccatcaacccctcggactctgccctccctccctccccacca
ccgggtctgcctttacacccaggggtcaaagagtctcttgtctag
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