Equus caballus (horse): 100052296 Help Entry 100052296         CDS       T01058                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism ecb  Equus caballus (horse) Pathway ecb04010   MAPK signaling pathway ecb04064   NF-kappa B signaling pathway ecb04120   Ubiquitin mediated proteolysis ecb04140   Autophagy - animal ecb04144   Endocytosis ecb04380   Osteoclast differentiation ecb04620   Toll-like receptor signaling pathway ecb04621   NOD-like receptor signaling pathway ecb04622   RIG-I-like receptor signaling pathway ecb04657   IL-17 signaling pathway ecb04722   Neurotrophin signaling pathway ecb04936   Alcoholic liver disease ecb05132   Salmonella infection ecb05133   Pertussis ecb05135   Yersinia infection ecb05140   Leishmaniasis ecb05142   Chagas disease ecb05145   Toxoplasmosis ecb05152   Tuberculosis ecb05160   Hepatitis C ecb05161   Hepatitis B ecb05162   Measles ecb05168   Herpes simplex virus 1 infection ecb05169   Epstein-Barr virus infection ecb05170   Human immunodeficiency virus 1 infection ecb05171   Coronavirus disease - COVID-19 ecb05200   Pathways in cancer ecb05222   Small cell lung cancer ecb05235   PD-L1 expression and PD-1 checkpoint pathway in cancer ecb05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:ecb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100052296 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     100052296 (TRAF6)    04064 NF-kappa B signaling pathway     100052296 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100052296 (TRAF6)    04140 Autophagy - animal     100052296 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100052296 (TRAF6)    04621 NOD-like receptor signaling pathway     100052296 (TRAF6)    04622 RIG-I-like receptor signaling pathway     100052296 (TRAF6)    04657 IL-17 signaling pathway     100052296 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     100052296 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     100052296 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100052296 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     100052296 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     100052296 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     100052296 (TRAF6)    05161 Hepatitis B     100052296 (TRAF6)    05160 Hepatitis C     100052296 (TRAF6)    05171 Coronavirus disease - COVID-19     100052296 (TRAF6)    05162 Measles     100052296 (TRAF6)    05168 Herpes simplex virus 1 infection     100052296 (TRAF6)    05169 Epstein-Barr virus infection     100052296 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     100052296 (TRAF6)    05135 Yersinia infection     100052296 (TRAF6)    05133 Pertussis     100052296 (TRAF6)    05152 Tuberculosis     100052296 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     100052296 (TRAF6)    05140 Leishmaniasis     100052296 (TRAF6)    05142 Chagas disease     100052296 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     100052296 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     100052296 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ecb04131]     100052296 (TRAF6)    04121 Ubiquitin system [BR:ecb04121]     100052296 (TRAF6) Enzymes [BR:ecb01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100052296 (TRAF6) Membrane trafficking [BR:ecb04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     100052296 (TRAF6) Ubiquitin system [BR:ecb04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100052296 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 TRAF3_RING RING_XB3-XBAT31 SlyX U-box zf-RING_11 Spc29 DUF4455 EzrA DUF3450 DUF16 Myosin_tail_1 UPF0242 ATG16 DUF7310 Sina_ZnF CENP-F_leu_zip Motif Other DBs NCBI-GeneID:  100052296 NCBI-ProteinID:  XP_023509660 UniProt:  A0A3Q2HK71 LinkDB All DBs Position 12:complement(2961726..2981996) Genome browser AA seq 541 aa AA seqDB search MSLLNCENSCGSSQTESDCCAAMASSCSAAAKDDSVSGTASTGNLSSSFMEDIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNGGCLHKMELRHLEDHQAHCEFALMNCPQCQHPFQKCQLNIHMLK ECPRRQVSCVNCAVSMAFEDKEIHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI PCTFNTFGCHEKMQRNHLARHLQENTQSHMRMLAQAVQSLSLALAPVPQRDMLPYDSAPL SRVSSGCYPEVRNFQETIQQLEGRLVRQDHQIRELTAKMETQSIYVSELKRTIRTLEDKV AEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ RCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPIRQNHEEIMDAKPELLAFQR PTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDTG V NT seq 1626 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaatagctgtggatccagccagactgaaagtgactgctgt gcagccatggccagctcctgtagtgctgcggcaaaagacgacagcgtgagtggaactgcc agcacggggaatctctccagctctttcatggaagatatccagggatatgatgtggagttt gacccacccctggagagcaagtatgaatgtcccatctgcttgatggcgctgcgggaagca gtgcaaacaccgtgcggccataggttctgcaaagcctgcatcatcaagtcaataagggat gcaggtcacaaatgtccagtcgacaatgaaatactgctggaaaatcaactatttcctgac aattttgcaaaacgagagattctttctctgatggtgaaatgtccaaatggaggttgtttg cacaagatggaactgaggcatcttgaggatcatcaagcacattgtgaatttgctcttatg aattgtccccagtgccagcatcccttccaaaaatgccaacttaatattcacatgctcaag gagtgtccaaggagacaggtttcttgtgtaaactgtgctgtatcgatggcatttgaagat aaagagatccatgaccagaactgtcctttggcaaatgtcatctgtgaatattgcaatacc atgctcatcagagaacagatgcctaatcattatgatctagactgtcctacagccccaatt ccatgcacgttcaatacttttggttgccatgaaaagatgcagaggaatcacttggcacgc cacctgcaagagaacacccagtcgcacatgagaatgttggcccaggctgtccagagttta agccttgccctagctcccgtacctcagcgggacatgctcccatatgattctgcccctctg tcccgggtgtcctctgggtgttacccagaggtccggaatttccaagaaaccattcagcag ttagagggtcgccttgtaagacaagaccatcaaatccgggagctgacagcgaaaatggaa actcagagcatatatgtaagtgagctcaaacgaactattcgaacccttgaggacaaagtt gctgaaatagaagcacagcaatgcaatggcatttatatctggaagattggcaactttggg atgcacttaaaatctcaagaagaggagaagcctgttgtcattcatagccctggattctac acaggcaaacctggatacaaactgtgcatgcgcctgcacctccagttacccaccgctcag cgctgtgcaaactatatatccctctttgtccacacgatgcaaggagagtatgacagccac ctcccttggcccttccagggtacaatacgccttacgattcttgatcagtccgaagcaccc ataaggcaaaaccatgaagagataatggatgccaaaccagagctgcttgccttccagaga cccacaatcccacggaacccaaaaggttttggctatgtgactttcatgcatctggaagct ctaagacaaagaaccttcattaaggatgatactttgttagtacgctgtgaagtctctacc cgctttgacatgggcagccttcggagggagggttttcagccacgaagcactgatactggg gtatag

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