Equus caballus (horse): 100052552
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Entry
100052552 CDS
T01058
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
ecb
Equus caballus (horse)
Pathway
ecb01524
Platinum drug resistance
ecb04115
p53 signaling pathway
ecb04210
Apoptosis
ecb04215
Apoptosis - multiple species
ecb05010
Alzheimer disease
ecb05012
Parkinson disease
ecb05014
Amyotrophic lateral sclerosis
ecb05016
Huntington disease
ecb05020
Prion disease
ecb05022
Pathways of neurodegeneration - multiple diseases
ecb05134
Legionellosis
ecb05152
Tuberculosis
ecb05160
Hepatitis C
ecb05161
Hepatitis B
ecb05162
Measles
ecb05164
Influenza A
ecb05168
Herpes simplex virus 1 infection
ecb05169
Epstein-Barr virus infection
ecb05200
Pathways in cancer
ecb05222
Small cell lung cancer
ecb05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
100052552 (APAF1)
04215 Apoptosis - multiple species
100052552 (APAF1)
04115 p53 signaling pathway
100052552 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100052552 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
100052552 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
100052552 (APAF1)
05160 Hepatitis C
100052552 (APAF1)
05164 Influenza A
100052552 (APAF1)
05162 Measles
100052552 (APAF1)
05168 Herpes simplex virus 1 infection
100052552 (APAF1)
05169 Epstein-Barr virus infection
100052552 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
100052552 (APAF1)
05152 Tuberculosis
100052552 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
100052552 (APAF1)
05012 Parkinson disease
100052552 (APAF1)
05014 Amyotrophic lateral sclerosis
100052552 (APAF1)
05016 Huntington disease
100052552 (APAF1)
05020 Prion disease
100052552 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
100052552 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100052552 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100052552 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
NB-ARC
WD40_CDC20-Fz
APAF1_C
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
APAF-1-like_WHD
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
CARD
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
eIF2A
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_like
WD40_RFWD3
RMC1_N
Beta-prop_NWD2_C
Beta-prop_NUP159_NUP214
Ge1_WD40
Beta-prop_DCAF4
CARD_2
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_WDR11_2nd
Utp8_b_propeller
AAA_16
AAA_22
NPHP3_N
DUF4590
NACHT
AAA_18
ATPase_2
Motif
Other DBs
NCBI-GeneID:
100052552
NCBI-ProteinID:
NP_001296086
Ensembl:
ENSECAG00000024703
VGNC:
15395
LinkDB
All DBs
Position
28:24119712..24188683
Genome browser
AA seq
1256 aa
AA seq
DB search
MDAKARNCLLQHREALEKDIKTSYIMDYMISDGVLTVSEEEKVKNEPTRQQKAAMLIKMI
LKKDNYCYISFYKALLQEGYKDLAALLHGGIPVLSSSNGKDSLVGVTSYVKTVLCEGGVP
QRPVVFVTRKKLVHAIRQKLLKLDGEPGWVTIYGMAGCGKSVLAAEAVRDHTLLEGCFPG
GVHWLSVGKQDKSGLLMKLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLL
ILDDVWDPWVLKAFDNQCQILLTTRDRSVTDSVMGPKYVIPVESGLGKEKGLEILSLFVN
MKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKCSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFVN
KSLLFCDRNGKSFRYYLHDLQVDFLTEKNRSQLQDLHRKIITQFQRHHRLHTLSPDQEDC
MYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKEISV
CSQDCSVCENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDNGML
YLEWINKKNIKNLSRLVVRPHTDAVYHACFSGDGQRIASCGADKTLQVFKAETGEKLLEI
KAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNNSHH
LLLATGSSDSFLKLWDLNEKDCRNTMFGHTNSVNHCRFSPDDKLLASCSADGSLKLWDVK
SANERKSINVKQFFISSEEPQEDMEVIVKCCSWSSDGARIMVAAKNKIFLVDVHTCGLLA
EIHTGHHSTIQYCDFSPSNHLAVVALSQYCVELWNMDSCLKVADCRGHLSWVHSVMFSPD
GSSFLTSSDDETIRLWETKKVCKNSGIVLKQEIDVLFQENEVMILAVDNMRRLQLINGKT
GQIDYLTEAQVSSCCLSPHLQYVALGGEDGAIKILELLNNRIFQSKIGHKSAVRHVQFTT
DGKTLISSSDDSVIQVWNWQSEEYVFLQAHQEAVKDFRLLRNSRLLSWSFDGTVKVWNII
TGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCS
VFSGDSTLLATGDDNGEIRIWSVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDSKML
VSAEGSLKWWNAVTGESAQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQVLE
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtttacttcaacatagagaagccctggaaaaggacatc
aaaacctcctacatcatggattacatgattagtgatggagttttaacagtatcggaggag
gaaaaagtaaaaaatgagcccactcgacagcaaaaagcagctatgttaattaaaatgata
cttaaaaaggataattattgctacatatcattctacaaggctctcctacaagaaggatat
aaagatcttgctgcccttctccatggtggcattcctgttctctcttcttccaatggcaaa
gattcgcttgttggagtaacttcatatgtaaagacagtcctgtgtgaaggtggagtacca
cagaggccagttgtttttgttactagaaagaagctggttcatgcaattcggcagaaactc
ctcaaattggatggtgaaccgggatgggtcaccatttatggaatggcaggttgtgggaag
tctgtattagctgcagaagctgttcgagatcataccctcttagaaggttgtttcccaggg
ggtgtgcattggctttcagttgggaaacaagacaaatctggacttctgatgaaactgcag
aatctttgcacacggttggatcaagatgagagtttctcccagaggcttccacttaatatt
gaagaggctaaagaccgtctccgcattctgatgctgcgcaaacacccaaggtctctgttg
atcttggatgatgtttgggatccttgggtattaaaagcttttgacaatcagtgtcagatt
cttcttacaaccagagacaggagtgttacagattcagtaatgggtcctaaatatgtaatc
cctgtggagagtggcttaggaaaagaaaaaggacttgaaattttatccctttttgttaat
atgaagaaagcagatttgccagaacaagctcacagtattataaaagagtgtaaaggttct
cctcttgtagtgtctttaattggtgcacttttacgtgattttcccaaccgctgggagtac
tacctcaggcagcttcagaataagcaatttaagaggataaggaaatgttcatcttatgat
tatgaagctctggatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaa
gattattacacagatctttccatccttcaaaaggatgttaaggtgcctacaaaggtatta
tgtattctctgggacatggaaactgaagaagttgaagacatactgcaggagtttgttaat
aagtctctcttattctgtgatcgaaatggaaaatcatttcgttattatttacatgatctt
caagtagatttccttacagagaagaatcgcagccagcttcaggatctgcacaggaagata
atcactcagttccagagacaccacaggctacatactctttcaccagatcaggaggactgc
atgtattggtacaattttctggcctatcacatggccagtgccaatatgcacaaagaactt
tgtgctttaatgttttccttggattggattaaagcaaaaacggaacttgtaggtcctgct
catctgattcatgaatttgtggaatataggcatatattggatgaaaaggagatttcagtt
tgttcacaggattgttcagtctgtgagaatttccaggagtttttatctttaaatggacat
cttcttggacgacagccatttcctaatattgtacaactgggtctctgtgaaccggaaact
tcagaagtttatcagcaagctaagctgcaggccaagcaggaggtcgataacggaatgctt
tacctggagtggataaacaaaaaaaacatcaagaatctctcccgcttagttgtccgcccc
catacagatgctgtttaccatgcttgcttttctggggatggtcaaagaatagcttcttgt
ggtgctgataaaaccttgcaggtgttcaaagctgaaaccggagagaaacttttagaaatc
aaggctcatgaggatgaagtgctttgctgtgcattctctacagatgacagatttatagca
acctgctcagtggataaaaaagtgaagatttggaattctatgactggggaactagtacat
acctatgatgagcactcagagcaagtcaattgctgccacttcaccaacaacagtcatcac
cttctgttagccactgggtcaagtgactccttcctcaaactctgggatttgaatgaaaaa
gattgtcgaaataccatgtttggtcatacaaattcagtcaatcactgcagattttcacca
gatgataaacttttggctagttgttcagctgatggatcattgaagctttgggatgtgaaa
tcagcaaacgagaggaaaagcattaatgtgaagcagttctttataagttcagaggagcct
caagaggatatggaagtgatagtgaaatgttgttcatggtcttctgatggtgctagaata
atggtggcagcgaaaaataaaatcttccttgttgacgttcatacctgtggcctattggca
gaaatccatacaggtcaccacagcacgatccagtactgtgacttctccccaagtaaccat
ttggcggtggtagctttgtcccagtactgtgtggagttgtggaatatggactcgtgttta
aaagtagctgattgcagaggacatttaagttgggttcattctgtgatgttttctcctgat
ggatcatcatttttgacatcttctgatgatgagacaattaggctctgggagacaaagaaa
gtatgtaaaaactctggtatagtgttaaagcaagaaatagacgttctgtttcaagaaaat
gaagttatgattctcgcagttgacaacatgagacgtctgcaactcattaatggaaaaaca
ggtcagattgattatctgactgaagctcaagttagttcctgttgcttaagtccacatctt
cagtacgttgcacttggaggagaagatggagccattaagattttagaactcctaaacaac
agaatcttccaatccaagattgggcacaagagcgctgtacggcacgtccagttcacaact
gatgggaagactcttatttcaagctctgatgattctgtaattcaggtatggaattggcaa
tcagaggaatatgtctttctgcaagcccatcaggaagcagtgaaagactttaggctcttg
agaaattcaagactgctttcttggtcttttgatggaacagtgaaggtgtggaatattatt
actggaagaatagaaaaagacttcgtctgtcaccaggatacagtactttcttgtgatatt
tctcctgatgctaccaagttttcatctacctctgctgacaagactgcaaagatttggagt
tttgaactcctttcccctcttcatgaattgaggggccataaaggctgtgtgcgctgctct
gtcttctctggggacagtacactgttggcgactggagatgacaacggagaaatcaggata
tggagtgtctcaaacggtgagcttcttcatttgtgtgctccgatttcagtagaagaagga
gctgctacccacggaggctgggtgactgacctttgcttttctccagatagcaaaatgctt
gtctctgctgaaggatctcttaagtggtggaatgctgtcactggagaatccgcacagacc
ttctacacaaatggaaccaatcttaagaaaatacatgtgtcccctgacttcaaaacatat
gtgactgttgataatcttggtattttatatattttacaggttttagagtaa
DBGET
integrated database retrieval system
