Equus caballus (horse): 100053503
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Entry
100053503 CDS
T01058
Symbol
C23H9orf72
Name
(RefSeq) protein C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
ecb
Equus caballus (horse)
Pathway
ecb04140
Autophagy - animal
ecb05014
Amyotrophic lateral sclerosis
ecb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100053503 (C23H9orf72)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
100053503 (C23H9orf72)
05022 Pathways of neurodegeneration - multiple diseases
100053503 (C23H9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100053503 (C23H9orf72)
Membrane trafficking [BR:
ecb04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
100053503 (C23H9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
100053503
NCBI-ProteinID:
NP_001288113
Ensembl:
ENSECAG00000022028
VGNC:
49249
LinkDB
All DBs
Position
23:complement(44950611..44974921)
Genome browser
AA seq
481 aa
AA seq
DB search
MSNLCPPPSPAVAKTEIALSGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLSEKGVIIVSLIFDGNWNGDRSTYGLSIILPQAE
LSFYLPLHRVCVDRLTHIIRKGRIWMHKERQENVQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDIADTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPAERKCSRLCEAESSFKYESGLFVQGLLKDSTGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRATSEEDMAQDTIIYTDESF
TPDLNIFQDVLHRDTLVKAFLDQVFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRNLKTDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPLYTSVQERDVLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctctgtccaccaccatctccagctgttgccaagacagagattgccttaagt
ggtgaatcgcctttattagcagctacctttgcttactgggacaatattcttggtcctaga
gtaagacacatttgggctccaaagacagaacaggtacttctcagcgatggagaaataact
tttcttgccaaccacaccctaaatggagaaattcttcgaaatgcagagagtggggctatc
gatgtaaagttttttgtcttgtctgaaaaaggagtgattattgtttcattgatctttgat
ggaaactggaatggagataggagcacatatggactatcaattatacttccacaggcggaa
cttagcttctacctcccgcttcacagagtgtgtgttgataggttaacacacattatcagg
aaaggaaggatatggatgcacaaggaaaggcaagaaaatgtccagaaaatagtcttagaa
ggcaccgagaggatggaagatcagggtcagagtattattccaatgcttactggagaagta
attcctgtcatggaactgctttcatctatgaaatcacacagtgttcctgaagagatagat
atagccgatactgttctcaacgatgatgatattggtgacagttgtcatgaaggcttcctt
ctcaatgccattagctcacacttgcagacctgcggctgttccgtcgtagtaggcagcagt
gcagagaaagtaaacaagatagtaagaacattatgcctttttctgactccagcagagaga
aaatgctcccgattatgtgaagcagaatcatcattcaaatacgagtcagggctctttgta
caaggtctgctaaaggattcaactggaagctttgtgctacccttccggcaagtcatgtat
gctccctatcccaccacacacatagatgtggatgtcaacaccgtcaagcagatgccgccc
tgtcatgaacatatttacaatcagcgcagatacatgaggtcagagctgacagcgttctgg
agggccacctcggaagaggacatggctcaggacaccatcatctacacagacgaaagcttc
actcctgatctgaatatttttcaagatgtcttacacagagacactctagtaaaagccttc
ctggatcaggtctttcatttgaaacctggtttatctctcaggagtactttccttgcacag
tttctactcgtccttcacagaaaagccttgacgctaataaaatatatagaagatgacacg
cagaaggggaagaaaccctttaaatctcttcggaacttgaagacagaccttgatttaaca
gcagagggcgatctgaacataataatggctctggctgagaagattaaaccaggcctgcac
tcctttatcttcggaagacctctctatactagtgtacaagaacgagatgttctgatgacg
ttttga
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