Equus caballus (horse): 100054221
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Entry
100054221 CDS
T01058
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
ecb
Equus caballus (horse)
Pathway
ecb04360
Axon guidance
ecb04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
100054221 (TRPC5)
09158 Development and regeneration
04360 Axon guidance
100054221 (TRPC5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecb01009
]
100054221 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecb04040
]
100054221 (TRPC5)
Protein phosphatases and associated proteins [BR:
ecb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100054221 (TRPC5)
Ion channels [BR:
ecb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100054221 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
100054221
NCBI-ProteinID:
XP_005614482
Ensembl:
ENSECAG00000023439
VGNC:
24553
LinkDB
All DBs
Position
X:complement(92519120..92796828)
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AA seq
974 aa
AA seq
DB search
MAQLYYKKVNYSPYRDRIPLQIVRAETELSAEEKAFLNAVEKGDYATVKQALQEAEIYYN
VNINCMDPLGRSALLIAIENENLEIMELLLNHSVYVGDALLYAIRKEVVGAVELLLSYRR
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQKRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLISPRSNLGLFI
KKPFIKFICHTASYLTFLFMLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIWGEIK
EMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETRAIDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPP
FNIIPSPKSFLYLGNWFNNTFCPKRDPDGRRRRHNLRSFTERHADSLIQNQHYQEVIRNL
VKRYVAAMIRNSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKHPRRSFSTSSTELSQ
RDDTNDGSGGARAKSKSVSFNLGCKKKVCHGPPLVRTMPRASGAQGKSKAESSSKRSIMG
PSLKKLGLLFSKFNGRMSEPNSEPMYTISDGIVQQHYMWQDIRYSQMEKGKAEACSQSEI
NLSEVELGEAQGAAQSSECPLACSSSLHCASSICSSNSKLLDSSEDVFETWGEACDLLMH
KWGDGQEEQVTTRL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcccaactgtactacaaaaaggtcaactactcaccatacagagaccgcatccccttg
caaattgtgagggctgagacggagctctctgcggaggagaaggccttcctcaatgctgtg
gagaagggggactacgccactgtgaagcaggcactacaggaggccgagatctactacaat
gtcaacatcaactgcatggatccgctgggccggagtgccctgctcattgccattgagaac
gagaacttggagatcatggagctcctgctgaaccacagcgtgtatgtaggcgatgcattg
ctctacgctatccgcaaggaagtagtgggtgctgtggagcttctgctcagctacaggcgg
cccagtggagagaagcaggtccccactctgatgatggacacccagttctccgagttcaca
ccagacatcactcccatcatgctggctgcccacaccaacaactacgaaatcatcaagttg
cttgtgcaaaaacgggtcactatcccacggccccaccagatccgctgcaactgtgtggag
tgtgtgtccagttcagaggtagacagcctgcgccactcccgttcccgactgaacatctat
aaagctctggcaagcccctcactcattgccttatcaagtgaggaccccatcctaactgcc
tttcgcctgggctgggagctcaaggagctcagcaaggtggagaatgagttcaaagctgag
tatgaggagctctcccaacagtgcaagctctttgccaaagacctgctggaccaagctcgg
agctcccgggaattggagatcatcctcaaccatcgagatgaccacagtgaagagcttgac
cctcagaagtaccatgatctggccaagctgaaggtggcgatcaaataccaccagaaagag
tttgtcgctcagcccaattgccaacagttgcttgccactctgtggtatgacggcttccct
ggatggcggcggaaacactgggtagtcaagcttctgacctgcatgaccattgggttcctg
tttcccatgctgtctatagcttatctgatctcacccaggagcaaccttgggctgttcatc
aagaaaccctttatcaagtttatctgccacacagcgtcatatctgaccttcctcttcatg
cttctcctggcttctcagcacatcgtcaggacagacctccatgtccagggacctcctcca
actgtcgtggaatggatgatattgccttgggttctcggtttcatttggggggagattaag
gaaatgtgggatggtggatttactgaatacatccatgactggtggaacctgatggatttt
gcaatgaattcactctacctggcaactatttccttgaagattgtggcttatgtcaagtat
aatggttctcgtccaagggaagaatgggaaatgtggcacccgactctgattgcagaagca
ctcttcgcaatatccaacattttaagttcactgcgtctcatatccctgttcacagccaac
tcccacttagggcctctgcagatctctttggggcgtatgctacttgatatcctcaaattc
ctctttatctactgtctggtactcctggctttcgccaacggattgaaccagctttacttt
tattatgagactagagcgattgatgagccgaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacgctctttgaaacccttcagtcactcttctggtctgtattt
ggccttttaaatctctatgtcaccaatgtgaaagcgagacacgagttcacagagtttgtg
ggagctaccatgtttgggacgtacaacgtcatctccctggtagtgctgctgaacatgctg
atcgccatgatgaacaactcctaccagcttattgctgatcatgccgatattgaatggaaa
tttgcaaggacaaaactctggatgagttactttgatgaaggtggcaccttgccacctcct
ttcaacatcatccccagtcccaagtcatttctataccttggtaactggttcaacaatacc
ttctgcccgaaaagagaccctgatggtagacggagaaggcacaacttgagaagcttcaca
gaacgccatgctgacagcctgatacagaatcaacactaccaggaagtcatcaggaattta
gtcaaaaggtatgtggctgctatgataagaaattccaaaacaaatgaggggctaacagaa
gaaaattttaaggaattaaagcaggacatctccagctttcgatatgaagtgcttgacctc
ttaggaaataggaagcacccaaggagaagcttttccaccagcagcactgaactctctcag
agggatgataccaatgatggcagtggtggggctcgggccaaatccaagagtgtctctttc
aatttaggctgcaagaaaaaggtctgccatgggccacctctcgtcagaaccatgccaaga
gccagtggtgcccaagggaagtcaaaagctgagtcatcaagcaaacgctctatcatgggt
ccttctctcaagaaactggggctcctattctccaagtttaatggtcgtatgtctgaaccc
aactcagagccaatgtacacaatttccgatggaatcgttcagcagcactatatgtggcag
gacatcagatattctcagatggagaaagggaaagcagaggcctgttctcaaagtgaaatt
aacctcagtgaggtagaattaggtgaagcccagggtgctgctcagagcagtgaatgccct
ctagcctgttccagctctcttcactgtgcatccagcatctgctcctcaaattctaaacta
ttagactcctcagaggatgtatttgaaacgtggggagaggcttgcgacctgctcatgcac
aaatggggtgatggacaggaagaacaagttacaactcggctctaa
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