Equus caballus (horse): 100057395
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Entry
100057395 CDS
T01058
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb00514
Other types of O-glycan biosynthesis
ecb04330
Notch signaling pathway
ecb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
100057395 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100057395 (RFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100057395 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ecb01003
]
100057395 (RFNG)
Enzymes [BR:
ecb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
100057395 (RFNG)
Glycosyltransferases [BR:
ecb01003
]
Glycan extension
O-Glycan
100057395 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
100057395
NCBI-ProteinID:
XP_023507506
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All DBs
Position
11:1190101..1197248
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AA seq
323 aa
AA seq
DB search
MSRARGVLCRACLALAAALAALLLLPLPRAPAPAPASTPGSRAPPARASAPRLRPEDVFI
AVKTTRKNHGPRLGLLLRTWISRARRQTFIFTDGDDPELQLQGAGSHVINTNCSAVHTRQ
ALCCKMSVEYDKFIESGRKWFCHVDDDNYVNPEGLLQLLSAFSPNQDVYLGRPSLDHPIE
ATERVQGGGTVTTIKFWFATGGAGFCLSRGLALKMSPWASLGSFMSTAERVRLPDDCTVG
YIVEGLLGARLLHNSLFHSHLENLQRLPPDTVLQQVTLSYGGPENPQNVVNVAGGFSLQQ
DPTRFKSVHCLLYPDTDWCPVQK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgcgcggggggtgctgtgccgggcctgcctcgcgctggccgcggccctggct
gcgctgctgctgctgccgctgccccgcgcccccgccccggccccggcctcaacccctggc
tcgcgcgcgccccctgcccgcgcctccgccccccgcctgcggcccgaggacgtcttcatc
gccgtcaagaccacccggaagaaccacgggcctcgcctagggctgctgctgcgcacctgg
atctcccgggcccgccggcagacattcatcttcaccgacggggatgaccctgagctacag
ctccagggagcaggcagccacgtcatcaacaccaactgctcagctgtgcacacccgccag
gcgctgtgctgcaagatgtcagtggagtatgacaagttcattgagtctggacgcaagtgg
ttttgccatgtggatgatgacaactacgtgaaccctgaaggcctgctgcagctgctctcc
gccttttcacccaaccaggacgtctacctggggcggcccagcctggaccaccccatcgag
gccaccgagagggtgcagggaggtggaactgtgacaaccatcaagttctggttcgctacc
ggtggggctgggttctgcctgagcagaggtcttgccctcaagatgagcccgtgggccagc
ctgggcagcttcatgagcacagctgagcgggtgcggctgccggacgactgcacggtgggc
tacatcgtggagggcctgctgggcgctcgcctgctacacaactcgctcttccactcccac
ctggagaacctgcagaggctgccacctgacactgtgctccagcaggtcaccctgagctac
gggggtcctgagaacccacagaacgtggtgaacgtggctgggggcttcagcctgcagcag
gaccccacacggtttaagtccgtccactgccttctctacccagacacagactggtgtcct
gtgcaaaagtag
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