Equus caballus (horse): 100057478 Help Entry 100057478         CDS       T01058                                  Symbol THBS1 Name (RefSeq) thrombospondin-1 precursor   KO K16857   thrombospondin 1 Organism ecb  Equus caballus (horse) Pathway ecb04015   Rap1 signaling pathway ecb04115   p53 signaling pathway ecb04145   Phagosome ecb04148   Efferocytosis ecb04151   PI3K-Akt signaling pathway ecb04350   TGF-beta signaling pathway ecb04510   Focal adhesion ecb04512   ECM-receptor interaction ecb04820   Cytoskeleton in muscle cells ecb05144   Malaria ecb05165   Human papillomavirus infection ecb05205   Proteoglycans in cancer ecb05206   MicroRNAs in cancer ecb05219   Bladder cancer Brite KEGG Orthology (KO) [BR:ecb00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     100057478 (THBS1)    04350 TGF-beta signaling pathway     100057478 (THBS1)    04151 PI3K-Akt signaling pathway     100057478 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100057478 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     100057478 (THBS1)    04148 Efferocytosis     100057478 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     100057478 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     100057478 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100057478 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     100057478 (THBS1)    05205 Proteoglycans in cancer     100057478 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     100057478 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100057478 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     100057478 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ecb04131]     100057478 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ecb00536]     100057478 (THBS1) Membrane trafficking [BR:ecb04131]  Endocytosis   Phagocytosis    Opsonins     100057478 (THBS1) Glycosaminoglycan binding proteins [BR:ecb00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100057478 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF Laminin_G_3 TSP1_ADAMTS Laminin_G_2 TSP1_CCN EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  100057478 NCBI-ProteinID:  NP_001295881 Ensembl:  ENSECAG00000008923 VGNC:  24072 LinkDB All DBs Position 1:complement(150310065..150326658) Genome browser AA seq 1170 aa AA seqDB search MGLAWGLSVLFLLHVCGSNRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAVERKDHSGQIFSVV SNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSIFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTNVLL TLNNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSNMVLELRGLRTIVTTLQDSIRK VTEENKELANELRRPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQT RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE TKACRKDACPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQI CNKQDCPIDGCLSNPCFAGTKCTSYPDGSWKCGACPPGYSGNGVQCEDVDECKEVPDACF NHNGEHRCRNTDPGYNCLPCPPRFTGSQPFGQGVEHAAANKQVCKPRNPCTDGTHDCNKN AKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPN LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDVDDICPENVDISETDFRRF QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAIGYDEFNAVDFSGTFFINTERDD DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD KTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggactcagtgtcctgttcctcttacatgtgtgtggctccaaccgc attccagagtctgggggagacaacagcgtgttcgacatctttgaactcacgggggctgcc cgcaagggctctggacgccggctggtgaagggtcctgacccttccagcccagctttccgc atcgaggatgccaacctgatcccccctgtgcctgatgacaagttccaagacctagtggat gctgtgcgggccgagaaagggttcctcctcctggcctccctgaggcagatgaagaagacc cggggcactctgctggccgtggagaggaaagaccactctggccagatcttcagtgtggtc tccaatggcaaggcgggcaccctggacctgagcctgaccgtgcaggggaagcagcatgtg gtgtccgtggaagaagcgctcctggcgaccggccagtggaagagcatcaccctgtttgtg caggaggacagggcccagctttacatcgactgtgagaagatggagaatgctgagctggac gtccccatccagagcatcttcaccagggacctggccagcatcgccagactccgcatcgca aaaggaggtgtcaatgacaatttccagggggtgctgcagaacgtgaggtttgtcttcgga accacaccagaagacatcctcaggaacaaaggctgctccagctctaccaatgtcctcctc accctcaacaacaatgtggtgaatggttccagccctgctatccgcactaactacatcggc cacaagacgaaggatctgcaggccatctgtggcatctcttgtgatgagctgtccaacatg gtcctggagctcaggggcctgcgtaccatcgtgaccacgcttcaggacagcatccgcaaa gtgactgaagagaacaaagaactggccaatgagctgcggaggcctcccctctgctaccac aacggagttcagtacaggaataatgaggaatggactgttgatagctgcactgagtgtcgc tgccagaactcagtcactatctgcaaaaaagtttcctgccccatcatgccctgctccaat gccacagttcctgatggagaatgctgcccccggtgttggcccagtgactctgcggacgat ggctggtccccatggtctgagtggacttcctgctctgtgacatgtggcaatggaatccag cagcgtggccgctcctgcgatagcctcaacaaccgatgcgagggctcctctgtccagacg cggacctgccacattcaggagtgtgataagagatttaaacaggatggcggctggagccac tggtccccatggtcatcttgctctgtgacatgtggtgatggtgtgatcacaaggatccgg ctctgcaactctcccagcccccagatgaatgggaaaccctgcgaaggcgaagctcgggag accaaggcctgcaggaaggatgcctgccccatcaatggaggctggggtccctggtccccg tgggacatctgttctgtcacctgtggaggaggggtgcagaaacgtagccggctctgcaac aaccccacaccccagtttggaggcaaggactgcgttggtgatgtgacagagaaccagatc tgcaacaagcaggactgtccaattgatggatgcctgtccaatccttgctttgctggtact aagtgtactagctaccctgacgggagctggaaatgtggcgcctgtccccccggttacagc ggaaatggcgtccagtgcgaagatgttgatgagtgcaaagaagtgcctgatgcctgcttc aaccacaatggcgagcaccggtgtaggaacacagatcccggctacaactgcctgccctgc ccgccgcgcttcactggctcgcagccctttggccagggcgtggagcatgccgctgccaac aaacaggtgtgcaagccccgcaacccctgcacagacgggacacatgactgcaacaagaac gccaagtgcaactacctgggccattacagcgaccccatgtaccgctgcgagtgcaagccc ggctacgcaggcaatggcatcatctgcggggaggacacggacctggacggctggcccaac gaggacctggtgtgcgtggccaatgcaacttaccactgcaaaaaggataattgccccaac cttcccaactcgggacaggaagactatgacaaggatggaattggtgatgcctgtgatgat gatgatgacaatgataaaattccagatgatagggacaactgtccattccattacaaccca gcccagtatgactatgacagagatgacgtgggagaccgctgtgacaactgcccctacaac cacaacccggatcaggctgacacggacaacaatggggaaggagacgcctgtgctgcagac attgatggggatggtatcctcaatgagcgagacaactgccagtatgtctacaacgtggac cagagggacacggatatggatggggttggagatcagtgtgataactgccccctggaacac aatccagatcagctcgactctgattcagaccgcattggagatacctgtgacaacaatcag gatattgacgaagatggccaccagaacaacctggacaactgtccctacgtgcccaatgcc aaccaagctgaccatgacaaagatggcaagggagatgcctgtgaccacgatgatgacaat gacggcattcctgatgacagggacaactgcagacttgtgcccaatcccgaccagaaggac tctgatggtgatggtcgaggtgatgcttgcaaagatgattttgaccacgacaatgtgcca gatgttgatgacatttgtcctgaaaacgttgatatcagtgaaactgatttccgccgattc cagatgattcctctagatcccaaagggacatctcaaaatgaccctaactgggttgtacgc catcagggtaaagaactcgtccagactgtcaactgtgatcctggacttgctataggttat gacgagtttaatgctgtggacttcagtgggaccttcttcatcaacaccgagagggatgat gactacgccgggtttgtgtttggctaccagtccagcagccgcttctatgttgtgatgtgg aagcaagtcacccagtcctactgggacaccaaccccacgagagctcagggatactcaggc ctttctgtgaaagttgtgaactccaccacagggcctggcgagcacctgcggaatgccctg tggcacacaggaaacacccctggccaggtgcgtaccctgtggcatgaccctcgtcacata ggctggaaagatttcactgcctacagatggcgtctcagccacaggccaaagacaggtttc attagagtggtgatgtatgaagggaagaaaatcatggctgactcaggacccatctatgac aaaacctatgctggcggcaggctagggttgtttgtcttctctcaagaaatggtgttcttc tcagacctgaaatatgaatgcagagattcctaa

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