Equus caballus (horse): 100059254
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Entry
100059254 CDS
T01058
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
ecb
Equus caballus (horse)
Pathway
ecb00310
Lysine degradation
ecb01100
Metabolic pathways
ecb04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
100059254 (SETDB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
100059254 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100059254 (SETDB1)
Enzymes [BR:
ecb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
100059254 (SETDB1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
100059254 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100059254 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
SET
Pre-SET
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
100059254
NCBI-ProteinID:
XP_005610219
Ensembl:
ENSECAG00000023954
VGNC:
22879
LinkDB
All DBs
Position
5:complement(42889619..42922534)
Genome browser
AA seq
1299 aa
AA seq
DB search
MTSLPGCIGLDAATAAVESEEIAELQKAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPSQPTAPPVQPVPPAPPLSPQAGDSESLES
QLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVPGGKPGITQTYRSPLGSTTSAPA
PPAPPAPPAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRSE
QYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDF
LFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERI
PGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYKRLEE
CLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIY
AGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGN
SGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGVSETASKDSRPPDL
GPPHIPVPPSIPIGGCNPPSSEETPKNKVASWLSCNNVSEGGFADSDSRSSFKTSEGGEG
RAGGGRGEAEKASTSGLGFKDEGDIKQAKKEDPDDRNKMSIVTESSRNYGYNPSPVKLEG
LRRPPSKTSMHQSRRLMASAQSNPDDVLTLSSSTESEGESGTSRKPTAGQTSATAVDSDD
IQTISSGSEGDDFEDKKNMSGPLKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAP
VRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFAS
KRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgacctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtctgaa
gagattgcagagctgcaaaaagcagtggttgaggagctgggtatctctatggaggagctt
cgacagttcatcgatgaggaactggaaaagatggactgtgtacagcagcgcaagaagcaa
ctagcggagttggagacatgggtaatacagaaagagtctgaggtggcccatgttgaccag
ctctttgatgatgcctccagggcagtgactaattgtgagtctttggtgaaggacttttac
tccaaactgggactacagtaccgggacagtagctctgaggatgaagcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccgaaagaccagaagctccgtgaagctatggctgccttaagaaagtcg
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggattta
cataaaggaaccttgagtcagatgtctggagaattgagcaaagatggtgacctgatagtc
agcatgcgcatcctgggcaagaagagaactaaaacatggcacaaaggcacccttattgcc
atccagacggttgggccaggaaagaagtacaaggtgaaatttgacaacaaaggaaagagt
ttactgtcggggaaccatattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgagtggtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtttctcattttttttgatgatggc
tatgcttcctatgtcacacaatctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaggaatatatcactgcttac
cccaatcgccccatggtgctgctcaagagtggccagcttatcaagacagagtgggaaggc
acatggtggaagtcccgagtcgaggaggtggatggcagcctcgtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacggctggagcccatgttcagc
atgaagacatcctcggcgtctgcactggaaaagaagcaagggggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgtggtccagtacacccaggatctgacc
agtactggaacccaattcaagccagtggagccctcacagcctacagccccacctgtccaa
cctgtcccacctgccccacctctgtccccccaggctggtgacagtgaaagcttagaaagc
cagcttgcccaatcacggaagcaggtagccaaaaagagcacttccttccggccaggatct
gtgggctctggtcattcctcccctacgtcccctgcactcagtgaaaatgtccctggtggg
aaacctgggatcacccagacgtacagatcacctttaggctcaacaacctctgccccagca
cccccagcccctccagctcctccagcccctccagcgcctccagcgcctccagccttccat
ggcatgctggagcgggcccccgcggaaccctcctaccgcgcccctatggagaaacttttc
tacttacctcatgtctgtagctatacttgtctgtctcgagtcagacctatgagaagtgag
caataccggggcaagaaccctctgctagttccactgctgtatgacttccggcggatgaca
gcccggcgccgagttaaccgcaagatgggctttcatgttatctataagacaccctgtggc
ctctgccttcggacaatgcaggagatcgaacgatacctttttgagactggctgtgacttt
ctcttcctggagatgttctgtttggatccgtatgttcttgtggaccggaagtttcagccc
tataagcctttttactatatcttggacatcacctatgggaaggaagatgttcccctatcc
tgtgtcaatgagattgacacaactcccccaccccaggtggcctacagcaaggaacgaatc
ccgggcaagggtgttttcattaacacaggccctgaatttctggttggctgtgactgcaag
gatgggtgccgggacaagtccaagtgtgcctgccatcaactaactatccaggctacagcc
tgcaccccaggcggccaaattaaccctaactctggctaccagtacaagagactagaagag
tgtctgcccacgggagtttatgagtgtaataaacgctgcaaatgtgacccaaacatgtgc
acaaaccggttggtgcagcatggactacaggttcggctacagctattcaagacacagaac
aagggttggggtatccgctgcttggatgacattgccaaaggctcctttgtctgtatttac
gcaggcaaaatcctgacagatgactttgcagacaaggagggcctggaaatgggtgatgag
tactttgccaatctggaccatatcgagagtgtggagaacttcaaggaaggatatgagagt
gatgccccctgttcctctgacagcagtggtgtagacttgaaggaccaggaagatggcaac
agtggtacagaagacccagaagagtccaatgatgatagctcagatgataacttctgtaag
gatgaggacttcagcaccagctcagtatggcgcagctatgctacccggcggcagacccgg
ggccagaaggagaatggagtgtctgagacagcttccaaggattcccgccctccagacctt
gggcccccacatattcctgtccctccatcaatccctataggtggctgcaatccaccttcc
tctgaagagacacccaagaataaggtggcttcgtggttgagctgcaataatgtcagtgaa
ggtggctttgctgactctgatagtcgttcatctttcaagactagcgaaggtggggaaggc
cgggctgggggaggcagaggggaggctgagaaggcctccacctcagggctgggcttcaag
gatgagggagacatcaagcaggccaagaaagaggaccccgatgaccgaaacaagatgtca
atagttactgaaagctctcgaaattatggttataatccttctcctgtgaagcttgaagga
cttcgccggccacctagtaagactagtatgcatcagagccgacgactcatggcctctgct
cagtccaaccctgatgatgtcctgacactgtccagcagcacagaaagtgagggggaaagt
gggaccagccgaaagcccactgctggtcagacttcagccacagcggttgacagtgatgat
atccagaccatctcctctggctctgaaggggatgactttgaggacaagaagaacatgtct
ggtccattgaagcgccaagtggcagtaaaatcaacccgaggctttgctcttaaatcaacc
catgggattgccattaaatcaaccaacatggcttccgtggaaaaaggggagagcgctcct
gttcgtaagaacactcgccagttctacgatggtgaggagtcttgctacatcatcgatgcc
aagcttgaaggcaacctgggccgttacctcaatcacagttgcagccccaacctgtttgtc
cagaatgtcttcgtggatactcatgatcttcgcttcccctgggtggccttctttgccagc
aagagaatccgggctgggacagaacttacttgggactacaactatgaggtgggcagtgtg
gaaggcaaggagctgctctgctgctgtggggccatcgaatgcagagggcgtcttctttag
DBGET
integrated database retrieval system
