KEGG   Equus caballus (horse): 100060996
Entry
100060996         CDS       T01058                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain isoform X1
  KO
K06752  MHC class II antigen
Organism
ecb  Equus caballus (horse)
Pathway
ecb04145  Phagosome
ecb04514  Cell adhesion molecules
ecb04612  Antigen processing and presentation
ecb04640  Hematopoietic cell lineage
ecb04658  Th1 and Th2 cell differentiation
ecb04659  Th17 cell differentiation
ecb04672  Intestinal immune network for IgA production
ecb04940  Type I diabetes mellitus
ecb05140  Leishmaniasis
ecb05145  Toxoplasmosis
ecb05150  Staphylococcus aureus infection
ecb05152  Tuberculosis
ecb05164  Influenza A
ecb05166  Human T-cell leukemia virus 1 infection
ecb05168  Herpes simplex virus 1 infection
ecb05169  Epstein-Barr virus infection
ecb05310  Asthma
ecb05320  Autoimmune thyroid disease
ecb05321  Inflammatory bowel disease
ecb05322  Systemic lupus erythematosus
ecb05323  Rheumatoid arthritis
ecb05330  Allograft rejection
ecb05332  Graft-versus-host disease
ecb05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100060996
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100060996
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100060996
   04612 Antigen processing and presentation
    100060996
   04658 Th1 and Th2 cell differentiation
    100060996
   04659 Th17 cell differentiation
    100060996
   04672 Intestinal immune network for IgA production
    100060996
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100060996
   05164 Influenza A
    100060996
   05168 Herpes simplex virus 1 infection
    100060996
   05169 Epstein-Barr virus infection
    100060996
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100060996
   05152 Tuberculosis
    100060996
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100060996
   05140 Leishmaniasis
    100060996
  09163 Immune disease
   05310 Asthma
    100060996
   05322 Systemic lupus erythematosus
    100060996
   05323 Rheumatoid arthritis
    100060996
   05320 Autoimmune thyroid disease
    100060996
   05321 Inflammatory bowel disease
    100060996
   05330 Allograft rejection
    100060996
   05332 Graft-versus-host disease
    100060996
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100060996
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100060996
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ecb04147]
    100060996
Exosome [BR:ecb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100060996
  Exosomal proteins of epithelial cells
   100060996
  Exosomal proteins of breast milk
   100060996
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3 Ig_2 I-set C2-set_2 ig C2-set_3
Other DBs
NCBI-GeneID: 100060996
NCBI-ProteinID: XP_005603849
Ensembl: ENSECAG00000021796
UniProt: A0A514YA18 A0A1W1GCJ3
LinkDB
Position
20:complement(34406363..34411623)
AA seq 263 aa
MTTLLLLLLGLSLGCTVEGGFVAHVESTCLLDDDGTPKDFTYCVSFNKDLLTCWDPEQAL
MVPREFGVLYPLAKSLSAYLNQYENLLQRLSTGLQDCANHTQPFWGSLTNRTWAPSVQVA
KTTPFNTKESVMLACYVWGFYPADVTITWRKNGQPVPPHSSAHKTVQPNGDWTYQTISHL
ATTPSFGDTYTCVVEHIGAPEPILQDWTPGLSPTQTVKVSVSVVTLGLGLILFFLGLLSW
RRARFSGYTILPGSNYPEGQNIS
NT seq 792 nt   +upstreamnt  +downstreamnt
atgaccacactcctgctgctgctgctgggcctcagcctgggctgcaccgtagaaggtggc
tttgtggcccatgtggaaagcacctgtctgttggatgatgatggcactccaaaagatttc
acgtattgtgtctccttcaacaaggatttgctgacctgctgggatccagaacaggcctta
atggttcctcgtgaatttggggtgctgtatcccttggccaaatctctctcagcttacctc
aaccaatatgaaaacctactccagcgcttgtccactgggctccaggactgtgccaatcac
acccagcccttctggggatcactgacaaataggacatgggcaccatctgtgcaagtagcc
aaaactactccttttaacacaaaggagtctgtgatgctggcttgctacgtgtggggcttc
tatccagctgatgtgaccatcacatggaggaagaatgggcagcctgtcccccctcacagc
agtgcccataagactgtccagcccaatggagactggacataccagactatctcccattta
gccacaaccccctcttttggggacacctacacctgtgtggtggagcacattggggctcct
gagcccatccttcaagactggacacctgggctctccccgacacaaacagtgaaggtttct
gtgtctgtggtgactctggggctgggcctcatcctcttctttcttggtttgctcagctgg
cggagagctaggttctctggctacactatcctccctgggtccaattatccagaaggtcag
aacatttcctag

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