KEGG   Equus caballus (horse): 100063038
Entry
100063038         CDS       T01058                                 
Symbol
AFF4
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
ecb  Equus caballus (horse)
Pathway
ecb03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100063038 (AFF4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecb03021]
    100063038 (AFF4)
Transcription machinery [BR:ecb03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     100063038 (AFF4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 100063038
NCBI-ProteinID: XP_023473468
Ensembl: ENSECAG00000011969
VGNC: 15146
LinkDB
Position
14:41950031..42043058
AA seq 1172 aa
MNREDRNVLRMKERERRNQEIQQGEDAFPPSSPLFAEPYKVTSKEDKLSSRIQSMLGNYD
EMKDFIGDRSIPKLVAIPKPTVPPTADEKSNPNFFEQRRGSSHQSSKWTPVGPAPSTSQS
QKRSSGLQSGHSSQRTSAGGSSGTNSSGQRHDRDSYSSSGSSSRKKGQHGSEHSKSRSSS
PGKPQAVSSLSSSHSRSHGNDHHSKDHQRSKSPRDPDANWDSPSRVPFSSGQHSSQSFPP
SLMSKSSSMLQKPTAYVRPMDGQESMEPKLSSEHYSSQPHGNSMTELKPSSKAHLTKLKI
PSQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKFPFPTKESQQSNFGPG
EQKRYNPSSKTSNGHQSKSMLKDDLKLSSSEDSDGEQDCDKTMPRSTPGSNSEPSHHNSE
GADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEPPPTNKWQLDNWLN
KVNPHKVSPASSVDSNIPSSQGYKKEGREQGTGNNYTDPGGPKETSSATPGRDSKTVQKG
SESGRGRQKSPAQSDSTTQRRTVGKKQPKKAEKAAAEEPRGGLKIESETPVDMTTSMPSS
RHKAATKGSRKPNIKKESKSSPRPSAEKKKYKSTSKSSQKSREIIETDTSSSDSDESESL
PPSSQTPKYPESNRTPLKPSSVEEEDSFFRQRMFSPMEEKELLSPLSEPDDRYPLIVKID
LNLLTRIPGKPYKETEPPKGEKKNVPEKHTREAQKQASEKVSNKGKRKHKSEDDNRANES
KKPKTEDKNSAGHKPSSNREYVPKSSYMSSKQSAAKEKDLLPSPAGPVPSKDPKTEHGSR
KRTISQSSSLKSSSNSNRENSGSSKNSSSTSKQKKSEGKTSSGSKEVKDKAPNSSSNCPP
STPTPDASKPRRTKLAFDDRNYSADHYLQEAKKLKHNADALSDRFEKAVYYLDAVVSFIE
CGNALEKSAQESKSPFLMYSETVELIKYTMKLKNYLAPDATAADKRLTVLCLRCQSLLYL
RLFKLKKENALKYSKTLTEHLKNSYNNSQAPSPGLGSKAVGMPSPVSPKLSPGNSGNYSS
GASSASASGSSVTIPQKIHQMAASYVQVTSNFLYATEIWDQAEQLSKEQKEFFAELDKAM
GPLIFNASIMADLVRYTRQGLHWLRQDTKLIS
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgaaccgtgaagaccggaatgtgctgcgtatgaaagaacgggaaaggcggaatcaggaa
attcagcagggcgaagacgccttcccacctagctcgccgctctttgccgagccgtacaaa
gttactagcaaagaagataagctatcaagtcgcattcagagtatgcttggaaactacgat
gaaatgaaggatttcataggagacagatctataccaaagcttgttgcaattcccaagcct
acagtaccaccgacagcagatgaaaaatctaacccaaatttctttgaacagagacgtggg
agctctcatcagagtagcaaatggactccagtaggacctgcacccagtacttctcagtct
cagaaacggtcctcaggcttacagagtggacacagtagccagcggaccagtgcaggtggc
agtagtggcactaatagtagtggccagaggcatgaccgtgactcatatagtagtagtggg
agcagtagccggaaaaaaggccagcatggatcagaacactccaaatcacgctcttccagc
cctggaaaaccccaggctgtttcttcattaagctccagtcattccaggtctcatgggaat
gatcaccacagcaaggatcatcagcgttccaaatcacctcgggaccctgatgcaaactgg
gattctccttcccgtgtacctttttcaagtgggcagcactcaagtcagtctttcccacct
tcattgatgtcaaagtccagttcaatgttacagaaacccactgcctatgtgcggcccatg
gacggacaggagtccatggaaccaaaactgtcctctgagcactacagcagccagccccat
ggtaacagcatgactgaactgaagcccagcagcaaagcacatctcaccaagctgaaaata
ccgtcccaaccattggatgcatctgcttctggtgatgtgagctgtgtggatgaaattctt
aaagagatgacgcattcatggcctccccctctaacggctattcatacaccatgcaaaaca
gaaccttccaaatttccttttccaactaaggaatctcagcagtccaattttggccctggg
gaacaaaaaagatataatccttcttctaaaacttcaaatggacaccagtctaaatcgatg
ttaaaagacgacttaaaactcagcagcagcgaggacagcgatggggaacaggattgtgat
aaaacaatgccaaggagtacaccaggaagtaactcggaaccttcgcaccataatagtgaa
ggagcggacaactccagggacgattcgagcagccacagtggatctgaaagcagctccggc
tctgactccgagagtgaaagtagttccagtgacagtgaggcaaatgagccatcccagagt
gcatctcctgagcctgaaccaccaccaacaaacaaatggcaacttgataattggttgaat
aaagtgaacccacataaagtgtcaccagcttcttctgtggacagtaatatcccgtcatct
caaggctataaaaaagaaggccgagaacagggcactgggaataactacactgatccggga
ggccctaaagaaacaagttctgctactcctggacgagactccaaaaccgttcaaaaggga
tccgaaagtgggcgtgggaggcagaagtctcctgcacagagtgacagcacaacacagagg
agaaccgtaggcaaaaagcaacccaaaaaggctgagaaggcagctgctgaagagccccgt
ggaggcctgaagatagaaagtgaaacccccgtagacatgactaccagcatgccctccagc
agacacaaagcagccaccaaaggctcaaggaaacccaacataaaaaaggagtccaaatct
tcccctcgaccttcagcagagaaaaagaaatacaagtcaacgagtaaatcttcccagaaa
tcgagggaaatcatagaaacggatacctcgtcctcagattcggatgaaagcgagagcctt
cctccttcctcacaaactcccaagtaccctgagagtaataggactcctcttaaaccctcc
tcagtggaggaagaagatagcttttttcggcaacgaatgttctctcctatggaagagaag
gaacttctttcacccctcagtgagcctgatgacaggtatccacttattgtgaagattgac
ctgaatctcttgaccagaataccaggaaagccttacaaagaaacagagccacccaagggg
gaaaagaaaaatgtgccagaaaagcacacaagagaggctcagaaacaagcctcagaaaaa
gtttccaacaaaggcaagaggaaacataagagtgaagatgataaccgagccaatgagagc
aagaaacccaaaacggaggacaagaattcggcaggccacaagccatcaagcaacagagag
tatgtccccaaatcaagttacatgtcatctaagcagagcgctgcaaaagaaaaggatttg
ttgccttctcctgctgggcctgttccttcaaaagatcccaaaacagagcatggctctcgg
aagaggactattagtcagtcttcttccttaaagtcgagtagtaacagcaacagggagaac
agtggcagcagcaaaaacagttcctccacatcaaagcagaagaagtctgaagggaagact
tccagcggctcgaaggaggtcaaggacaaggctccaaatagctcttctaattgtcctcca
tctacaccaactcctgatgcttctaagcctcggagaacaaagcttgcctttgatgacaga
aattattcagcagaccattatttacaagaagcaaaaaagctaaagcacaatgcagacgca
ttgtctgataggtttgagaaagctgtatattatcttgatgctgtggtatctttcattgaa
tgtgggaatgcattagagaaaagtgctcaggaatccaaatccccattccttatgtattca
gagacggtggagctcatcaaatacactatgaagctaaagaattacttagcaccagatgct
acagctgcggataaaagactcacagtactttgcctacgatgccagtctttgctgtacctg
aggctattcaaactgaagaaggaaaatgctctgaagtactcaaagacgctgacagagcac
ctgaagaattcttacaataattctcaagcaccatcacctggcttgggaagcaaagctgtg
gggatgccttcccctgtttctccaaagttgtcgccaggcaattcaggaaattattcttct
ggggccagtagtgcttcagcaagtggttcttcagtgaccattccacagaagatccaccag
atggcagccagctatgttcaggttacatccaacttcctctatgccaccgaaatttgggac
caagctgaacagctttccaaagagcaaaaagaattctttgctgaactggataaagcaatg
ggccctctcatctttaacgcaagcatcatggcagacctagttcgctatacccggcaggga
ctgcactggcttcgccaggataccaagttgatatcttga

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