Equus caballus (horse): 100063392
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Entry
100063392 CDS
T01058
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
ecb
Equus caballus (horse)
Pathway
ecb04015
Rap1 signaling pathway
ecb04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100063392 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100063392 (RAPGEF6)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
PDZ
RA
RasGEF_N
cNMP_binding
PDZ_6
PDZ_2
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
100063392
NCBI-ProteinID:
NP_001288205
Ensembl:
ENSECAG00000021067
LinkDB
All DBs
Position
14:43126316..43327594
Genome browser
AA seq
1613 aa
AA seq
DB search
MNSPVDPGTRQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLLSARARYERYSG
NQILFCSETIARCWYILLSGSVLMKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDFLHREIPARQSRRRFRKINYKGERQTITDDVDINSYLSLPADLTKMHITDNPHP
QVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEEID
RTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVV
EQAGAIILEDGQELDSWYVILNGTVEIIHPDGKVENLFMGNSFGITPTLDKQYMHGVVRT
KVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKATP
ERLIMHLIEEHSIVDPTYIEDFLLTYRTFLESPLDVGVKLLEWFKIDSLRDKVTRIVLLW
VNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRESP
LHFSLSGGSEKGFGIFVEGVEPSSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRNN
THLALTVKTNIFVFKELLSRTEQEKSGVPHIPKIAEKKSNRHSIQDVPGDIEQTSQEKGN
KKVKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMPI
PGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCHAV
HEFGLSGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLCS
DEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNTHLK
EFEDIVNQETFWVATEILTESNQLKRMKLIKHFIKIALHCRECKNFNSMFAVISGLNLSS
VARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNVLSSQSMQPPIIPLYPVVKKDMT
FLHEGNDSKVDGLVNFEKLRMIAREIRQVVRMTSANMDPAMMFRQRKKRWRSLGSLSQGS
TNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDVETDEEKFQMMSLQ
CEPAYSTLTKNLNEKRSAKSSEMSPVPTRSSGQAAKAHLHQPHRVSQVLQVPAVNLHPMR
KKGQAKDPATLSTGLPQKVLGTTEEISGKKHTEDTISMASSLHSSPPASPQGSPRKGYTL
IPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSAALQDERCSSQAVAVPESTGALEKTEH
SSGAGDHSHLSPGWTLSKPSLVKSLAVSSSMSNEEISHEHIIIEAADSGRGSWTSCSSSS
HDNFQNLPNPKGWDFLNSYRHTHLDGPIAEVEPTDCEPYSCPKGCSRTCGQNKGSLETNQ
VRQSWASSSSLSDTYEPNYGTVKRRVLESTPGESSEGLELKDGTDSVYKTVTSSTEKGLI
VYCVTSPKKEDRYREPPPTPPGYMGISLADLKEGPHLHLKPPDYSVAVQRSKMMHNSLSR
LPPASLSSNPVACVPSKIVTQPQRHNLQPSHPKVAAVTDADSEADENEQVSAV
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcccgtggaccccggcactaggcaggcgcttaagaagaagccgcccgaacgg
acccccgaggacttaaatactatttattcttaccttcatggaatggaaatattatcaaat
ctcagggaacatcagcttagattgttgtctgcaagagcacgatacgagagatacagtggc
aatcaaattcttttttgttcagaaactattgccagatgttggtatattctgctttctgga
tctgtgctaatgaaagactccatggtcttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtgttagagccttcagaaatgattgtggtagagaat
tccaaagataatgaagattttctacatagagagattcctgccagacagtctcgacgaaga
tttcggaaaattaactataaaggagagcgtcaaactatcactgatgatgtggacattaac
agctatctttctcttccagccgatcttaccaagatgcacatcacagacaaccctcatcca
caggtgactcatgtgtcttctagtcagtctggttgtagcatcgccagtgactctgggagc
agcagtttatctgatatctatcaggctacagaaagtgaggtaggagatgtagatttaaca
cgtcttccagaaggacctgttgattctgaagacgaagaagaggaagatgaagagattgat
cgaacagatcctctgcaggggcgagatcttgttcgagaatgccttgaaaaagaacctgca
gacaaaactgatgatgacattgaacaattactggagtttatgcaccagctccctgctttt
gcaaacatgaccatgtctgtgaggagagaactctgctcagtgatgatttttgaagtggta
gagcaggctggagctattattcttgaagatgggcaagagcttgactcatggtatgttatt
ttaaacggcaccgtggaaatcattcatccagatggaaaagttgaaaatctctttatggga
aatagttttggaattactcccactctggataagcagtacatgcatggagttgttaggact
aaagtagatgattgtcagtttgtctgcatagcccagcaggattattggagaattttaaat
catgtggaaaagaatacccataaagttgaagaagagggagaaattgttatggttcatgag
caccgtgaacttgatcggagtggaaccaggaaaggacacatcgtaatcaaggcaacacct
gagcgtctcatcatgcatttaatagaagagcattccattgtggacccaacttatatagaa
gatttcctattaacttacaggacatttcttgaaagtccgttggatgttggggtcaaacta
ttggaatggtttaaaattgacagcttaagggataaggtaacacggattgtattattatgg
gtaaataatcattttaatgattttgaaggtgatcctgctatgactcgatttctggaggaa
tttgaaaaaaatctggaagatacaaaaatgaatggtcatctccgtttgttgaatattgcc
tgtgctgcaaaggctaagtggagacaagttgtgctgcagaaggcttcccgggagtcccct
ctgcatttcagccttagtggaggaagtgagaagggatttggtatttttgttgaaggagtg
gaacccagcagcaaagctgctgatgcaggactgaaacgtggtgatcagataatggaagta
aatggacaaaactttgagaatattacatttgtgaaggcccttgaaattttgaggaataat
actcatcttgcgcttactgtaaagaccaacatttttgtgttcaaagaattacttagtagg
actgaacaagagaaatctggtgttcctcatattcccaaaattgctgaaaaaaaaagtaat
cgccattcaatccaagatgtaccaggagatattgaacagacatcacaagagaaaggaaat
aagaaagtaaaagcaaatacggtttcaggtggaagaaacaaaatcaggaaaattttggat
aaaacacgatttagtatcttgcctccaaaactgtttagtgatggaggcctgagccagtca
caagacgacagcattgtgggaacgagacactgtaggcacagtttggctataatgcctatt
cctggaacactgtcatccagcagccctgatctcctgcagcctaccaccagcatgttggat
ttttccaatccttcagatattcctgatcaagttataagagttttcaaagcagatcaacag
agttgctacattatcatcagtaaagacaccacagctaaagaagttgtttgtcatgctgtt
catgaatttggtttgtctggtgcatctgacacatattctctctgtgaagtttctgttact
cctgagggtgttataaaacagcgaagacttccggaccagttctccaaattggctgataga
attcagctcaatggaaggtattatttaaaaaataacatggagacagaaaccttatgttca
gatgaagatgctcaagaactagttaaggaaagccaattatccatgcttcagctaagtacc
attgaggtggccactcagctgtcaatgagggactttgatttgtttcgtaatattgagcct
actgaatacattgatgacctttttaagttagattccaaaacaggaaatactcatttgaaa
gagtttgaggacattgtaaaccaagagacattctgggttgccacagagattttaactgaa
tcaaatcaactcaaacgaatgaagcttattaagcattttattaaaattgcacttcattgt
cgagaatgtaagaacttcaattccatgtttgcagtaatcagtggcttgaacctgtcttct
gttgcacgactcagaggtacttgggaaaagttacctagcaaatatgagaaacaccttcaa
gatctgcaagacctttttgatccatctagaaacatggcaaagtacagaaatgttctaagt
agtcaaagcatgcagcctccaattattccactctaccctgtggtcaagaaagatatgaca
tttctacatgaaggaaatgactccaaagtagatggtttagtaaactttgagaagctaaga
atgattgccagggagatccgtcaggttgttcgaatgacttctgctaacatggacccagct
atgatgttccgacagaggaagaagaggtggcggagtctggggtcactgagtcaaggcagc
acaaactcaaacatgctggatgttcagggaggtgctcacaaaaaaagggcacggcgcagc
tctctgcttaacgccaagaagctatacgaagatgcccaaatggcacggaaagtaaagcag
tatctttccagtctagatgtagagacagatgaggagaagtttcagatgatgtcattgcag
tgcgagcctgcatatagtaccttgaccaagaacttaaatgagaagagatcagccaaatca
tcagaaatgtctccagtgcctacgaggtcatctggccaagcagctaaagcccatttgcat
cagccccacagagtaagccaggtgcttcaagtgccagctgttaatttgcaccccatgagg
aagaagggacaagcaaaagaccctgccacattgagtacaggtttacctcagaaggtttta
ggaacaactgaagaaataagtggtaagaaacatacagaagatactatttcgatggcatca
tccttgcattctagtcctcctgcatctcctcaaggttcccctcgcaaaggttatacactt
ataccatcagctaaatctgacaacttgtctgactccagccatagtgagatttcttcacgg
tccagcattgtgagcaattgttccgttgactccatgtctgcagctctacaggatgaacgg
tgttcctcccaggctgtggcggttcctgaatccactggggcattggaaaagacagagcac
tcctcaggagcaggagaccatagtcatcttagccctgggtggacactctcaaagccatct
ctagtcaagagtttagctgtctcatcttctatgagcaatgaagagatttctcatgagcat
atcattatagaggcagccgatagtggtcgtggaagttggacttcctgttcaagcagctcc
catgacaacttccagaaccttccaaacccaaaaggctgggattttttgaactcttataga
catacccatttggatggccccattgctgaagttgaacccactgactgtgagccctattcc
tgtcctaaaggctgctctagaacttgtggtcagaataaaggaagcctggagacaaatcag
gtgagacagagttgggcctcctccagttctctgtctgacacttatgaaccaaactatggg
acagttaagcggagagtgttggagagcaccccaggtgaatcatctgaaggcttggaactt
aaggatggcactgactcagtttataaaactgttacttcaagtacagaaaagggcttgatt
gtgtactgtgtcacctcacccaagaaggaggataggtatagggagccacctcccactcct
ccaggatacatggggatttctttagcggatctaaaggaaggaccccacctacacctaaaa
cctccagattatagtgtggcagtgcagaggtcaaagatgatgcataacagcctctctaga
ctgccacccgcttctctcagtagcaaccctgtggcctgtgttccatcgaagattgtaact
cagcctcagaggcataatttgcagccatcccatcctaaagtagcagctgtgactgacgca
gatagcgaagcagatgaaaatgaacaggtttcagcagtctag
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integrated database retrieval system
