Equus caballus (horse): 100072204
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Entry
100072204 CDS
T01058
Symbol
TRPC3
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
ecb
Equus caballus (horse)
Pathway
ecb04360
Axon guidance
ecb05017
Spinocerebellar ataxia
ecb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100072204 (TRPC3)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100072204 (TRPC3)
05022 Pathways of neurodegeneration - multiple diseases
100072204 (TRPC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecb04040
]
100072204 (TRPC3)
Ion channels [BR:
ecb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100072204 (TRPC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
MFS_4
Motif
Other DBs
NCBI-GeneID:
100072204
NCBI-ProteinID:
XP_023492378
Ensembl:
ENSECAG00000023168
VGNC:
24550
LinkDB
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Position
2:106448695..106519772
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AA seq
936 aa
AA seq
DB search
MSTKVKKCKEQARVTFPAPEEEDEGEDEGAEPQRRRRGWRGVNGGLEPRPAPSQREPHGY
RPPPFSPGPDMSMEGSPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERFLDAAE
YGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIGDALLL
AISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITPIILAA
HCQKYEVVHMLLMKGARIERPHDYFCKCGDCMEKQRHDSFSHSRSRINAYKGLASPAYLS
LSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILN
GDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAI
KCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFNASDRF
EGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPREYILQL
WNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFTYARDK
WLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVF
LAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFIENIGY
VLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTLPPPFS
LVPSPKSFVYFIMRIINFSKCRQRRLQKDIEMGMGNSKSRFSKCFAVHLNLMQHCELNLF
TQSNSRVFESHSFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDIS
SLRYELLEDKSQATEELAVLIHKLSEKLNPSMPRCE
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaagaagtgcaaggagcaagcgagggtgaccttccccgcgccggag
gaggaggacgagggcgaggacgagggcgcggagccgcagcgccgccggcggggctggagg
ggcgtcaacggggggctcgagccgcgccccgcgccctcgcagcgagaaccgcacggctac
cgcccgccgcccttctcgccgggacccgacatgtccatggagggaagcccgtccttgagg
cgcaagacggtgatgcgggagaagggccggcgccaggccgtccggggccctgccttcatg
ttcaacgaccggggcaccagcctcacggcggaggaggagcgcttcctcgacgccgccgag
tacggcaacatccctgtggtgcgcaagatgctggaagagtccaagacgctgaacgtcaac
tgcgtggactacatgggccagaatgcgctgcaactggccgtgggcaacgagcacctggaa
gtgaccgagctgctgctcaagaaggaaaacctggcgcgcatcggcgatgccctgctgctc
gccattagcaagggctacgtgcgcatcgtggaggccatcctcaaccaccccggcttcgcg
gccagcaagcgcctgaccctgagcccctgcgagcaggagctgcaggacgacgacttctac
gcctacgacgaggacggcacgcgcttctcgcccgacatcacccccatcatcctggcggca
cactgccagaagtacgaggtggtgcacatgctgctgatgaagggcgccaggatcgagcgg
ccgcacgactatttctgcaagtgcggggactgtatggagaagcagaggcacgactccttt
agccactcgcgctcgaggatcaatgcctacaaggggctggccagcccggcgtacctgtcc
ttgtccagcgaggaccccgtgctcaccgccctggagctcagcaacgagctggccaagctg
gccaacatagagaaggaattcaagaatgactatcggaagctctccatgcaatgcaaagac
tttgtagtgggtgtgctggatctttgccgagactcggaagaggtagaagctattctcaat
ggagatttggagtcggcagagcccctggaggtgcacaggcataaagcgtcgttgagtcgt
gtcaaacttgctattaagtatgaagtcaaaaagtttgtggctcatcccaactgccagcag
cagctcctgaccatctggtacgagaacctctccggccttcgggaacagaccatcgccatc
aagtgtctggttgtgctggtggtggccttgggccttccgtttcttgccatcggctactgg
attgcaccttgcagcaggctggggaaaattctgcgaagcccttttatgaagtttgtggca
catgctgcctctttcatcatcttcctgggcctgcttgtgttcaacgcctcagacagattc
gaaggcatcaccacgctgccaaatatcactgtcattgactatcccaaacagatcttcagg
gtcaaaaccacccagttcacgtggaccgaaatgctaattatggtctgggttcttggaatg
atgtggtctgagtgtaaagagctctggctggaaggacctagggaatacattttgcagttg
tggaatgtgctagactttgggatgctctccatcttcattgctgctttcacggccagattc
ttagctttccttcaggcaacaaaagcgcaacagtatgtggacagttatgtccaagagagc
gacctcagtgaagttactcttccaccagagatacagtatttcacttatgccagagataaa
tggctcccttccgaccctcagatcatatctgaaggcctctatgccatagccgttgtgctc
agcttctctcgaatcgcgtacatcctccctgcgaatgagagctttggccccttacagatc
tctcttggaaggacagtgaaggacatattcaagttcatggtcctctttattatggtgttt
cttgcctttatgattggcatgttcatactttattcttattaccttggggctaaagtaaat
gctgcttttaccactgtagaagaaagtttcaagactttgttttggtcaatatttggcttg
tctgaagtgacttctgttgtgctcaaatatgatcacaaattcatagagaatatcggatat
gttctttatggaatatacaatgtaactatggtggtcgttttactcaacatgctaattgct
atgatcaatagttcatatcaagaaattgaggacgacagtgatgtagaatggaagtttgca
cgttcgaaactttggttatcttattttgatgacggaaaaacgttacctccacccttcagt
ctagttcctagtcccaagtcatttgtttatttcatcatgcggatcattaacttttccaaa
tgcagacagagaaggctacagaaggatatagaaatgggaatgggtaactcaaagtccagg
ttttcaaagtgctttgctgtacacttgaacctcatgcaacactgtgagttaaacctcttc
actcagtctaactcaagagtttttgaatcacacagttttaacagcattctcaatcagcca
acacgttatcagcagataatgaaaagacttataaagcggtatgttttgaaagcacaagta
gacaaagaaaatgatgaagttaatgaaggtgaattaaaggaaatcaagcaagatatctcc
agccttcgttatgaacttctggaggacaagagccaagcaactgaggaattagccgttcta
attcataaactcagtgagaaactgaatcccagcatgccgagatgtgaatga
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