Equus caballus (horse): 100629288
Help
Entry
100629288 CDS
T01058
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
ecb
Equus caballus (horse)
Pathway
ecb03018
RNA degradation
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100629288 (LSM3)
09123 Folding, sorting and degradation
03018 RNA degradation
100629288 (LSM3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100629288 (LSM3)
03041 Spliceosome [BR:
ecb03041
]
100629288 (LSM3)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
100629288 (LSM3)
mRNA degradation factors
5'-3' decay
Lsm complex
100629288 (LSM3)
Spliceosome [BR:
ecb03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
100629288 (LSM3)
Complex C
U2 snRNP components
100629288 (LSM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
vATP-synt_E
DUF150_C
Motif
Other DBs
NCBI-GeneID:
100629288
NCBI-ProteinID:
XP_003363113
Ensembl:
ENSECAG00000007803
VGNC:
19819
UniProt:
A0A9L0T2N6
LinkDB
All DBs
Position
16:4510390..4527914
Genome browser
AA seq
102 aa
AA seq
DB search
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgtggatcagcaacaaactaccaacaccgtagaagagcccttggatctg
atcaggctcagcctggatgagcgaatttatgtgaaaatgagaaacgacagagagcttcga
ggtagattacatgcttatgatcagcatttaaatatgatattgggagatgtagaagaaact
gtgactactatagaaattgatgaagaaacatatgaagagatatataaatcaacaaaacgg
aatatcccgatgctctttgtccggggagatggtgttgtactagttgcccctccattgaga
gttggctga
DBGET
integrated database retrieval system