KEGG   Equus caballus (horse): 100629288
Entry
100629288         CDS       T01058                                 
Symbol
LSM3
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
ecb  Equus caballus (horse)
Pathway
ecb03018  RNA degradation
ecb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ecb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100629288 (LSM3)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100629288 (LSM3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ecb03019]
    100629288 (LSM3)
   03041 Spliceosome [BR:ecb03041]
    100629288 (LSM3)
Messenger RNA biogenesis [BR:ecb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100629288 (LSM3)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100629288 (LSM3)
Spliceosome [BR:ecb03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100629288 (LSM3)
 Complex C
  U2 snRNP components
    100629288 (LSM3)
SSDB
Motif
Pfam: LSM TIG_SUH vATP-synt_E DUF150_C
Other DBs
NCBI-GeneID: 100629288
NCBI-ProteinID: XP_003363113
Ensembl: ENSECAG00000007803
VGNC: 19819
UniProt: A0A9L0T2N6
LinkDB
Position
16:4510390..4527914
AA seq 102 aa
MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEET
VTTIEIDEETYEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG
NT seq 309 nt   +upstreamnt  +downstreamnt
atggcggacgacgtggatcagcaacaaactaccaacaccgtagaagagcccttggatctg
atcaggctcagcctggatgagcgaatttatgtgaaaatgagaaacgacagagagcttcga
ggtagattacatgcttatgatcagcatttaaatatgatattgggagatgtagaagaaact
gtgactactatagaaattgatgaagaaacatatgaagagatatataaatcaacaaaacgg
aatatcccgatgctctttgtccggggagatggtgttgtactagttgcccctccattgaga
gttggctga

DBGET integrated database retrieval system