Escherichia coli O6 K2 H1 CFT073 (UPEC): c3335
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Entry
c3335 CDS
T00106
Symbol
ygcF
Name
(GenBank) Hypothetical protein ygcF
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ecc
Escherichia coli O6:K2:H1 CFT073 (UPEC)
Pathway
ecc00790
Folate biosynthesis
ecc01100
Metabolic pathways
Module
ecc_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ecc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
c3335 (ygcF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecc03016
]
c3335 (ygcF)
Enzymes [BR:
ecc01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
c3335 (ygcF)
Transfer RNA biogenesis [BR:
ecc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
c3335 (ygcF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AAN81783
UniProt:
A0A0H2VA91
LinkDB
All DBs
Position
complement(3177637..3178308)
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AA seq
223 aa
AA seq
DB search
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAK
TKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETS
GTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTD
DKPRVIALQPISQKEDATRLCIDTCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgattaacgagatgttccagaccctgcaaggtgagggttactttaccggc
gtccccgccatttttattcgtttacagggatgtccggttggctgtgcctggtgcgacacc
aaacacacctgggaaaagcttgaggatcgggaagtctcccttttcagcattctggcgaag
accaaagagagtgataagtggggggcggcgagcagtgaagatttgctggctgtcattggc
cgtcagggatacaccgcgcgtcatgtggtgattacgggtggtgagccttgcattcatgat
ttgctgccactgactgacctgctcgaaaagaacggttttagctgccagatcgaaaccagt
ggtactcatgaagtacgctgcacaccgaatacctgggttaccgtatcaccaaagctaaat
atgcgcggtggctatgaagtgttgtcacaagccctggagcgagccaacgaaatcaaacac
ccagtaggacgcgtacgtgatattgaagcactggatgaattgctggcgacgctgaccgat
gataaaccgcgagtcattgcacttcagccaattagccagaaggaagatgctacgcgttta
tgtatcgatacctgcattgcgcgcaactggcgtttgtcgatgcagacacataaatatttg
aatattgcctga
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